Itzkovitz Shalev, Baruch Leehod, Shapiro Ehud, Segal Eran
Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot 76100, Israel.
Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9278-83. doi: 10.1073/pnas.0712207105. Epub 2008 Jun 26.
The nervous system contains trillions of neurons, each forming thousands of synaptic connections. It has been suggested that this complex connectivity is determined by a synaptic "adhesive code," where connections are dictated by a variable set of cell surface proteins, combinations of which form neuronal addresses. The estimated number of neuronal addresses is orders of magnitude smaller than the number of neurons. Here, we show that the limited number of addresses dictates constraints on the possible neuronal network topologies. We show that to encode arbitrary networks, in which each neuron can potentially connect to any other neuron, the number of neuronal addresses needed scales linearly with network size. In contrast, the number of addresses needed to encode the wiring of geometric networks grows only as the square root of network size. The more efficient encoding in geometric networks is achieved through the reutilization of the same addresses in physically independent portions of the network. We also find that ordered geometric networks, in which the same connectivity patterns are iterated throughout the network, further reduce the required number of addresses. We demonstrate our findings using simulated networks and the C. elegans neuronal network. Geometric neuronal connectivity with recurring connectivity patterns have been suggested to confer an evolutionary advantage by saving biochemical resources on the one hand and reutilizing functionally efficient neuronal circuits. Our study suggests an additional advantage of these prominent topological features--the facilitation of the ability to genetically encode neuronal networks given constraints on the number of addresses.
神经系统包含数万亿个神经元,每个神经元都形成数千个突触连接。有人提出,这种复杂的连接性是由突触“粘附密码”决定的,其中连接由一组可变的细胞表面蛋白决定,这些蛋白的组合形成神经元地址。估计的神经元地址数量比神经元数量小几个数量级。在这里,我们表明有限数量的地址对可能的神经元网络拓扑结构施加了限制。我们表明,要编码任意网络,其中每个神经元都可能与任何其他神经元连接,所需的神经元地址数量与网络大小成线性比例。相比之下,编码几何网络布线所需的地址数量仅随着网络大小的平方根增长。几何网络中更有效的编码是通过在网络的物理独立部分中重新利用相同的地址来实现的。我们还发现,有序几何网络,其中相同的连接模式在整个网络中重复,进一步减少了所需的地址数量。我们使用模拟网络和秀丽隐杆线虫神经元网络来证明我们的发现。有人提出,具有重复连接模式的几何神经元连接性一方面通过节省生化资源,另一方面通过重新利用功能高效的神经元回路,赋予了进化优势。我们的研究表明,这些突出的拓扑特征还有一个额外的优势——在地址数量受限的情况下,便于对神经元网络进行基因编码。