Schmidt Matthias, Zahn Stefan, Carella Michela, Ohlenschläger Oliver, Görlach Matthias, Kothe Erika, Weston James
Leibniz-Institut für Altersforschung, Beutenbergstrasse 11, 07745 Jena, Germany.
Chembiochem. 2008 Sep 1;9(13):2135-46. doi: 10.1002/cbic.200800017.
The nickel complex of a synthetic nonapeptide (HCDLPCFVY-NH2) is capable of catalytically disproportionating O2(.-) and is thus a functional biomimetic for nickel superoxide dismutases. This represents a simplification as compared to a NiSOD "maquette" that is based on a dodecapeptide that was recently reported [Inorg. Chem. 2006, 45, 2358]. The 3D solution structure reveals that the first six residues form a stable macrocyclic structure with a preformed binding site for Ni(II). Proline 5 exhibits a trans peptide linkage in the biomimetic and a cis conformation in NiSOD enzymes. DFT calculations reveal the source of this preference. Mechanistic consequences for the mode of action (identity of the fifth ligand) are discussed. The SOD activity is compared to enzymatic systems, and selected modifications allowed the biomimetic to be reduced to a functional minimal motif of only six amino acids (ACAAPC-NH2).
一种合成九肽(HCDLPCFVY-NH₂)的镍配合物能够催化歧化超氧阴离子(O₂⁻),因此是镍超氧化物歧化酶的功能性仿生物。与基于最近报道的十二肽的镍超氧化物歧化酶“模型”相比,这是一种简化。三维溶液结构表明,前六个残基形成了一个稳定的大环结构,带有一个预先形成的镍(II)结合位点。脯氨酸5在仿生物中呈现反式肽键,而在镍超氧化物歧化酶中呈顺式构象。密度泛函理论计算揭示了这种偏好的来源。讨论了作用模式(第五个配体的身份)的机制后果。将超氧化物歧化酶活性与酶系统进行了比较,通过选定的修饰,仿生物可简化为仅由六个氨基酸组成的功能性最小基序(ACAAPC-NH₂)。