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从高度发达的细菌共生体“聚集绿菌”中鉴定和分析四个候选共生基因。

Identification and analysis of four candidate symbiosis genes from 'Chlorochromatium aggregatum', a highly developed bacterial symbiosis.

作者信息

Vogl Kajetan, Wenter Roland, Dressen Martina, Schlickenrieder Martina, Plöscher Matthias, Eichacker Lutz, Overmann Jörg

机构信息

Bereich Mikrobiologie, Department Biologie I, Ludwig-Maximilians-Universität München, Maria-Ward-Str. 1a, München, Germany.

出版信息

Environ Microbiol. 2008 Oct;10(10):2842-56. doi: 10.1111/j.1462-2920.2008.01709.x. Epub 2008 Aug 14.

DOI:10.1111/j.1462-2920.2008.01709.x
PMID:18707609
Abstract

The consortium 'Chlorochromatium aggregatum' currently represents the most highly developed interspecific association between prokaryotes. It consists of green sulfur bacteria, so-called epibionts, which surround a central, motile, chemotrophic bacterium. Four putative symbiosis genes of the epibiont were recovered by suppression subtractive hybridization and bioinformatics approaches. These genes are transcribed constitutively and do not occur in the free-living relatives of the epibiont. The haemagglutinin-like putative gene products of open reading frames (ORFs) Cag0614 and Cag0616 are unusually large and contain repetitive regions and RGD tripeptides. Cag0616 harbours two betagamma-crystalline Greek key motifs. Cag1920 codes for a putative haemolysin whereas the gene product of Cag1919 is a putative RTX-like protein. Based on detailed analyses of Cag1919, the C-terminal amino acid sequence comprises six repetitions of the motif GGXGXD predicted to form a Ca(2+)-binding beta roll. Intact 'C. aggregatum' consortia disaggregated upon the addition of EGTA or pyrophosphate, but stayed intact in the presence of various lectine-binding sugars or proteolytic enzymes. Unlike other RTX toxins, a gene product of Cag1919 could not be detected by (45)Ca(2+) autoradiography, indicating a low abundance of the corresponding protein in the cells. The RTX-type C-terminus coded by Cag1919 exhibited a significant similarity to RTX modules of various proteobacterial proteins, suggesting that this putative symbiosis gene has been acquired via horizontal gene transfer from a proteobacterium.

摘要

“聚集绿硫菌”共生体目前代表了原核生物间最为高度发达的种间关联。它由绿色硫细菌(即所谓的体表共生菌)组成,这些细菌围绕着一个中央的、可运动的化养细菌。通过抑制性消减杂交和生物信息学方法,发现了体表共生菌的四个假定共生基因。这些基因组成型转录,在体表共生菌的自由生活亲缘物种中并不存在。开放阅读框(ORF)Cag0614和Cag0616的类血凝素假定基因产物异常大,包含重复区域和RGD三肽。Cag0616含有两个βγ-晶状体希腊钥匙模体。Cag1920编码一种假定的溶血素,而Cag1919的基因产物是一种假定的RTX样蛋白。基于对Cag1919的详细分析,其C端氨基酸序列包含基序GGXGXD的六个重复,预计形成一个Ca(2+)结合β折叠。完整的“聚集绿硫菌”共生体在添加EGTA或焦磷酸盐后会解体,但在存在各种凝集素结合糖或蛋白水解酶的情况下保持完整。与其他RTX毒素不同,通过(45)Ca(2+)放射自显影未检测到Cag1919的基因产物,表明细胞中相应蛋白的丰度较低。由Cag1919编码的RTX型C端与各种变形菌门蛋白质的RTX模块具有显著相似性,表明这个假定的共生基因是通过水平基因转移从变形菌获得的。

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