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深入了解维生素K依赖性羧化酶的偶联机制:组氨酸160突变破坏谷氨酸碳负离子的形成以及维生素K环氧化与谷氨酸羧化的有效偶联。

Insight into the coupling mechanism of the vitamin K-dependent carboxylase: mutation of histidine 160 disrupts glutamic acid carbanion formation and efficient coupling of vitamin K epoxidation to glutamic acid carboxylation.

作者信息

Rishavy Mark A, Berkner Kathleen L

机构信息

Department of Molecular Cardiology, Lerner Research Institute, Cleveland Clinic Lerner College of Medicine at Case Western Reserve University, 9500 Euclid Avenue, Cleveland, Ohio 44195, USA.

出版信息

Biochemistry. 2008 Sep 16;47(37):9836-46. doi: 10.1021/bi800296r. Epub 2008 Aug 22.

Abstract

Vitamin K-dependent (VKD) proteins become activated by the VKD carboxylase, which converts Glu's to carboxylated Glu's (Gla's) in their Gla domains. The carboxylase uses vitamin K epoxidation to drive Glu carboxylation, and the two half-reactions are coupled in 1:1 stoichiometry by an unknown mechanism. We now report the first identification of a residue, His160, required for coupling. A H160A mutant showed wild-type levels of epoxidation but substantially less carboxylation. Monitoring proton abstraction using a peptide with Glu tritiated at the gamma-carbon position revealed that poor coupling was due to impaired carbanion formation. H160A showed a 10-fold lower ratio of tritium release to vitamin K epoxidation than wild-type enzyme (i.e., 0.12 versus 1.14, respectively), which could fully account for the fold decrease in coupling efficiency. The Ala substitution in His160 did not affect the K m for vitamin K and caused only a 2-fold increase in the K m for Glu and 2-fold decrease in the activation of vitamin K epoxidation by Glu. The H160A K m for CO 2 was 5-fold higher than the wild-type enzyme. However, the k cat for H160A carboxylation was 8-9-fold lower than the wild-type enzyme with all three substrates (i.e., Glu, CO 2, and vitamin K), suggesting a catalytic role for His160 in carbanion formation. We propose that His160 facilitates the formation of the transition state for carbanion formation. His160 is highly conserved in metazoan VKD carboxylases but not in some bacterial orthologues (acquired by horizontal gene transfer), which has implications for how bacteria have adapted the carboxylase for novel functions.

摘要

维生素K依赖性(VKD)蛋白通过VKD羧化酶被激活,该羧化酶在其γ-羧基谷氨酸(Gla)结构域中将谷氨酸(Glu)转化为羧化谷氨酸(Gla)。羧化酶利用维生素K环氧化来驱动Glu羧化,并且这两个半反应通过未知机制以1:1的化学计量比耦合。我们现在报告首次鉴定出耦合所需的一个残基His160。H160A突变体显示出野生型水平的环氧化,但羧化程度明显降低。使用在γ-碳位置用氚标记的Glu的肽监测质子抽取表明,耦合不良是由于碳负离子形成受损。H160A显示氚释放与维生素K环氧化的比率比野生型酶低10倍(即分别为0.12对1.14),这可以完全解释耦合效率降低的倍数。His160中的丙氨酸取代不影响维生素K的K m,并且仅导致Glu的K m增加2倍以及Glu对维生素K环氧化激活的降低2倍。H160A对CO 2的K m比野生型酶高5倍。然而,H160A羧化的k cat比野生型酶低8至9倍,所有三种底物(即Glu、CO 2和维生素K)均如此,这表明His160在碳负离子形成中起催化作用。我们提出His160促进碳负离子形成过渡态。His160在后生动物VKD羧化酶中高度保守,但在一些细菌直系同源物(通过水平基因转移获得)中不保守,这对细菌如何使羧化酶适应新功能具有影响。

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