Afridi Sarwat, Naeem Muhammad, Hussain Abid, Kakar Naseebullah, Babar Masroor Ellahi, Ahmad Jamil
Faculty of Biotechnology and Informatics, BUITEMS, Quetta, Pakistan.
Mol Biol Rep. 2009 Jul;36(6):1511-4. doi: 10.1007/s11033-008-9342-0. Epub 2008 Sep 3.
A molecular study was conducted to investigate the prevalence of Hepatitis C virus genotypes in HCV infected population of Balochistan. Forty HCV seropositive samples belonging to seven different locations of Balochistan were collected from different health care centres. Qualitative analysis of these samples using PCR resulted in 28 positive samples. The PCR positive samples were subjected to genotyping using the method described by Ohno et al (J Clin Microbiol 35:201-202, 1997) with minor modifications. Genotyping of 28 samples revealed three different genotypes including 3a, 3b and 1a. The most prevalent genotype was 3a with rate of 50% followed by genotype 3b and 1a, respectively. Nine samples remained untyped, suggesting the need of further investigation of genotypes in this region. It has been proposed that sequencing of these samples may be helpful to unreveal these genotypes and further epidemiology of HCV genotypes. Further more, extensive and large scale studies are needed to understand the epidemiology of HCV genotypes, as no such study has been carried in this province.
开展了一项分子研究,以调查俾路支省丙型肝炎病毒(HCV)感染人群中HCV基因型的流行情况。从不同的医疗保健中心收集了来自俾路支省七个不同地点的40份HCV血清阳性样本。使用聚合酶链反应(PCR)对这些样本进行定性分析,结果有28个阳性样本。对PCR阳性样本采用Ohno等人(《临床微生物学杂志》35:201 - 202,1997年)描述的方法进行基因分型,并稍作修改。对28个样本进行基因分型,发现了三种不同的基因型,包括3a、3b和1a。最常见的基因型是3a,占比50%,其次分别是基因型3b和1a。有9个样本未能分型,这表明该地区需要进一步对基因型进行研究。有人提出,对这些样本进行测序可能有助于揭示这些基因型以及HCV基因型的进一步流行病学情况。此外,由于该省尚未开展此类研究,因此需要进行广泛且大规模的研究以了解HCV基因型的流行病学情况。