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[八种鲟鱼线粒体DNA控制区的多态性及基于DNA的物种鉴定系统的开发]

[Polymorphism of the mitochondrial DNA control region in eight sturgeon species and development of a system for DNA-based species identification].

作者信息

Miuge N S, Barmintseva A E, Rastorguev S M, Miuge V N, Barmintsev V A

出版信息

Genetika. 2008 Jul;44(7):913-9.

Abstract

Intraspecific and interspecific nucleotide sequence variations of the mtDNA control region (D-loop) were studied with mtDNAs isolated from tissue specimens of more than 1400 sturgeons of nine species: Russian sturgeon Acipenser gueldenstaedtii, Persian sturgeon A. persicus, Siberian sturgeon A. baerii, Amur sturgeon A. schrenkii, Fringebarbel sturgeon A. nudiventris, sterlet A. ruthenus, stellate sturgeon A. stellatus, beluga Huso huso, and kaluga H. dauricus. The results were used to analyze the interspecific variation of the mtDNA control region in the given set of species and to develop a test system of ten species-specific primers, which allowed genetic identification intravital tissue specimens, spawn, and food products of eight species. The system proved suitable for multiplex PCR. A method was developed for the first time to reliably differentiate the A. baerii mitotype and the baerii-like mitotype of A. gueldenstaedtii. It was found that, although genetically separate, A. gueldenstaedtii and A. persicus are relatively young species and have common mitochondrial haplotypes, precluding their identification via mtDNA analysis alone. To develop a system for species identification of A. gueldenstaedtii and A. persicus, it is necessary to study the polymorphism of nuclear markers.

摘要

利用从9种1400多条鲟鱼的组织样本中分离出的线粒体DNA(mtDNA),研究了mtDNA控制区(D环)的种内和种间核苷酸序列变异。这9种鲟鱼分别是:俄罗斯鲟Acipenser gueldenstaedtii、波斯鲟A. persicus、西伯利亚鲟A. baerii、史氏鲟A. schrenkii、裸腹鲟A. nudiventris、小体鲟A. ruthenus、闪光鲟A. stellatus、欧洲鳇Huso huso和达氏鳇H. dauricus。研究结果用于分析给定物种组中mtDNA控制区的种间变异,并开发了一个包含10种物种特异性引物的检测系统,该系统可对8种鲟鱼的活体组织样本、鱼卵和食品进行基因鉴定。该系统被证明适用于多重PCR。首次开发出一种方法,能够可靠地区分西伯利亚鲟的线粒体类型和俄罗斯鲟的类西伯利亚鲟线粒体类型。研究发现,尽管俄罗斯鲟和波斯鲟在基因上是独立的,但它们是相对年轻的物种,拥有共同的线粒体单倍型,因此仅通过mtDNA分析无法对它们进行鉴定。为了开发俄罗斯鲟和波斯鲟的物种鉴定系统,有必要研究核标记的多态性。

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