Meharenna Yergalem T, Oertel Patricia, Bhaskar B, Poulos Thomas L
Department of Molecular Biology and Biochemistry, University of California, Irvine, California 92697-3900, USA.
Biochemistry. 2008 Sep 30;47(39):10324-32. doi: 10.1021/bi8007565. Epub 2008 Sep 5.
Cytochrome c peroxidase (CCP) and ascorbate peroxidase (APX) have very similar structures, and yet neither CCP nor APX exhibits each other's activities with respect to reducing substrates. APX has a unique substrate binding site near the heme propionates where ascorbate H-bonds with a surface Arg and one heme propionate (Sharp et al. (2003) Nat. Struct. Biol. 10, 303-307). The corresponding region in CCP has a much longer surface loop, and the critical Arg residue that is required for ascorbate binding in APX is Asn in CCP. In order to convert CCP into an APX, the ascorbate-binding loop and critical arginine were engineered into CCP to give the CCP2APX mutant. The mutant crystal structure shows that the engineered site is nearly identical to that found in APX. While wild-type CCP shows no APX activity, CCP2APX catalyzes the peroxidation of ascorbate at a rate of approximately 12 min (-1), indicating that the engineered ascorbate-binding loop can bind ascorbate.
细胞色素c过氧化物酶(CCP)和抗坏血酸过氧化物酶(APX)具有非常相似的结构,然而CCP和APX在还原底物方面均不表现出对方的活性。APX在血红素丙酸酯附近有一个独特的底物结合位点,抗坏血酸在该位点与一个表面精氨酸和一个血红素丙酸酯形成氢键(夏普等人,《自然结构生物学》,2003年,第10卷,第303 - 307页)。CCP中的相应区域有一个长得多的表面环,APX中抗坏血酸结合所需的关键精氨酸残基在CCP中是天冬酰胺。为了将CCP转化为APX,将抗坏血酸结合环和关键精氨酸引入CCP,得到CCP2APX突变体。突变体晶体结构表明,工程改造位点与APX中的位点几乎相同。虽然野生型CCP没有APX活性,但CCP2APX以约12分钟(-1)的速率催化抗坏血酸的过氧化反应,这表明工程改造的抗坏血酸结合环能够结合抗坏血酸。