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广东汉族人群22个Y染色体短串联重复序列位点的多态性及其与12个群体的遗传关系

[Polymorphism of 22 Y-STR loci in Guangdong Han population and genetic relationship with 12 populations].

作者信息

Shi Mei-Sen, Bai Ru-Feng, Yu Xiao-Jun, Tang Jian-Pin

机构信息

Key Laboratory of Evidence Science (China University of Political Science and Law), Ministry of Education, Beijing 100088, China.

出版信息

Yi Chuan. 2008 Sep;30(9):1136-42. doi: 10.3724/sp.j.1005.2008.01136.

Abstract

To investigate the genetic polymorphisms of 22 Y-chromosomal short tandem repeats(STR) loci in Guangdong Han population, and to evaluate their forensic application values and genetic relationships with 12 other populations. These Y-STR loci (DYS19, DYS389/, DYS390, DYS391, DYS392, DYS393, DYS385, DYS437, DYS438, DYS439, DYS461, DYS481, DYS504, DYS505, DYS508, DYS533, DYS576, DYS588, DYS607, DYS634, and DYS643) were analyzed in 216 unrelated healthy Guangdong Han individuals by three multiplex PCR systems including the PowerPlex Y System. Cluster analysis and phylogenic trees were applied to show the genetic distance among the populations. As a result, a total of 214 haplotypes were identified and the overall haplotype diversity for the 22 Y-STR loci was 0.9999. The gene diversity values (GD) for each locus ranged from 0.3299 (DYS634) to 0.9425 (DYS385). Comparing with 12 other populations, the genetic distance between Guangdong and Chaoshan Han population was the smallest (-0.0030), while that between Guangdong and Northeast Han Chinese was the largest (0.0195). The phylogenetic tree was similar to the results of clustering analysis. Multiplex detection of the 22 Y-STR loci revealed a highly polymorphic genetic distribution, which would be very powerful for establishing a Y-STR database, for population genetics and forensic practice.

摘要

为研究广东汉族人群22个Y染色体短串联重复序列(STR)基因座的遗传多态性,评估其法医学应用价值以及与其他12个群体的遗传关系。采用包括PowerPlex Y系统在内的三种复合PCR系统,对216名无血缘关系的广东汉族健康个体的这些Y-STR基因座(DYS19、DYS389I、DYS390、DYS391、DYS392、DYS393、DYS385、DYS437、DYS438、DYS439、DYS461、DYS481;DYS504、DYS505、DYS508、DYS533、DYS576、DYS588、DYS607、DYS634和DYS643)进行分析。应用聚类分析和系统发育树展示群体间的遗传距离。结果,共鉴定出214种单倍型,22个Y-STR基因座的总体单倍型多样性为0.9999。每个基因座的基因多样性值(GD)范围为0.3299(DYS634)至0.9425(DYS385)。与其他12个群体相比,广东汉族与潮汕汉族群体之间的遗传距离最小(-0.0030),而广东汉族与东北汉族之间的遗传距离最大(0.0195)。系统发育树与聚类分析结果相似。22个Y-STR基因座的复合检测显示出高度多态的遗传分布,这对于建立Y-STR数据库、群体遗传学研究和法医学实践具有很强的实用性。

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