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长江中上游两个鲢鳙种群微卫星遗传变异分析。

[Genetic variation analysis of two silver carp populations in the middle and upper Yangtze River by microsatellite.].

作者信息

Wang Chang-Zhong, Liang Hong-Wei, Zou Gui-Wei, Luo Xiang-Zhong, Li Zhong, Tian Hua, Hu Guang-Fu

机构信息

1. Fisheries College of Huazhong Agricuhural University, Wuhan 430070, China; 2. Key Lab of Freshwater Fish Germplasm Resources and Biotechnology Certificated by Ministry of Agriculture, Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Jingzhou 434000, China E-mail:

出版信息

Yi Chuan. 2008 Oct;30(10):1341-8. doi: 10.3724/sp.j.1005.2008.01341.

DOI:10.3724/sp.j.1005.2008.01341
PMID:18930896
Abstract

Thirty nine microsatellite markers were applied to analyze the genetic diversity of two silver carp populations in the middle and upper reaches of the Yangtze River. The following parameters were calculated: average observed number of alleles, average effective number of alleles, genetic heterozygosity, polymorphism information content (PIC), genetic similarity coefficient, genetic distance, Hardy-Weinberg balance deflection index. These results indicated that the average observed number of alleles in each microsatellite locus of the Wanzhou population and Jianli populations is 6.128 and 4.974, respectively; the average effective number of alleles is 4.107 and 3.395, respectively; and the number of total alleles of these 39 microsatellite loci is 259. The PIC of polymorphic loci varies between 0.077-0.865, and the average PIC is 0.617. The average observed heterozygosity (Ho) of two populations is 0.834 and 0.775, respectively, and the average expective heterzygosity (He) is 0.713 and 0.623, respectively. The genetic similarity coefficient of two populations is 0.618 and the genetic distance of these populations is 0.482. These results indicated that the two populations belong to different popula-tions for the obvious genetic differentiation.

摘要

应用39个微卫星标记分析长江中上游两个鲢鱼群体的遗传多样性。计算了以下参数:平均观察等位基因数、平均有效等位基因数、遗传杂合度、多态信息含量(PIC)、遗传相似系数、遗传距离、哈迪-温伯格平衡偏离指数。结果表明,万州群体和监利群体每个微卫星位点的平均观察等位基因数分别为6.128和4.974;平均有效等位基因数分别为4.107和3.395;这39个微卫星位点的总等位基因数为259个。多态位点的PIC在0.077 - 0.865之间变化,平均PIC为0.617。两个群体的平均观察杂合度(Ho)分别为0.834和0.775,平均期望杂合度(He)分别为0.713和0.623。两个群体的遗传相似系数为0.618,遗传距离为0.482。这些结果表明,这两个群体因明显的遗传分化而属于不同群体。

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