黑麦（Secale cereale L.）6R染色体的整合图谱。
A consensus map of chromosome 6R in rye (Secale cereale L.).
作者信息
Stojałowski Stefan, Myśków Beata, Milczarski Paweł, Masojć Piotr
机构信息
Department of Genetics and Plant Breeding, Agricultural University, Słowackiego 17, 71-434 Szczecin, Poland.
出版信息
Cell Mol Biol Lett. 2009;14(2):190-8. doi: 10.2478/s11658-008-0042-5. Epub 2008 Oct 31.
Abstract
Four F(2) mapping populations derived from crosses between rye inbred lines DS2 x RXL10, 541 x Ot1-3, S120 x S76 and 544 x Ot0-20 were used to develop a consensus map of chromosome 6R. Thirteen marker loci that were polymorphic in more than one mapping population constituted the basis for the alignment of the four maps using the JoinMap v. 3.0 software package. The consensus map consists of 104 molecular marker loci including RFLPs, RAPDs, AFLPs, SSRs, ISSRs, SCARs, STSs and isozymes. The average distance between the marker loci is 1.3 cM, and the total map length is 135.5 cM. This consensus map may be used as a source of molecular markers for the rapid development of new maps of chromosome 6R in any mapping population.
摘要
利用从黑麦自交系DS2×RXL10、541×Ot1 - 3、S120×S76和544×Ot0 - 20杂交产生的四个F(2)作图群体构建了6R染色体的整合图谱。在多个作图群体中表现多态性的13个标记位点构成了使用JoinMap v. 3.0软件包对四张图谱进行比对的基础。整合图谱由104个分子标记位点组成，包括RFLP、RAPD、AFLP、SSR、ISSR、SCAR、STS和同工酶。标记位点之间的平均距离为1.3 cM，图谱总长度为135.5 cM。该整合图谱可作为分子标记来源，用于在任何作图群体中快速构建新的6R染色体图谱。
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本文引用的文献
1
Chromosomal rearrangements in the rye genome relative to that of wheat.小麦与黑麦基因组间的染色体重排。
Theor Appl Genet. 1993 Feb;85(6-7):673-80. doi: 10.1007/BF00225004.
2
A linkage map of rye.黑麦的连锁图谱。
Theor Appl Genet. 1994 May;88(2):243-8. doi: 10.1007/BF00225904.
3
A molecular linkage map of rye.黑麦的分子连锁图谱。
Theor Appl Genet. 1996 Nov;93(7):1112-8. doi: 10.1007/BF00230133.
4
QTLs for resistance to preharvest sprouting in rye (Secale cereale L.).黑麦（Secale cereale L.）抗穗发芽的数量性状基因座
J Appl Genet. 2007;48(3):211-7. doi: 10.1007/BF03195215.
5
A genetic map of 1,000 SSR and DArT markers in a wide barley cross.一个广泛大麦杂交中1000个SSR和DArT标记的遗传图谱。
Theor Appl Genet. 2007 Aug;115(3):383-91. doi: 10.1007/s00122-007-0572-7. Epub 2007 May 22.
6
New genetic map of rye composed of PCR-based molecular markers and its alignment with the reference map of the DS2 x RXL10 intercross.基于PCR的分子标记构建的黑麦新遗传图谱及其与DS2×RXL10杂交组合参考图谱的比对。
J Appl Genet. 2007;48(1):11-24. doi: 10.1007/BF03194653.
7
A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits.一张将DArT标记与SSR、RFLP和STS基因座以及农业性状相联系的大麦高密度一致性图谱。
BMC Genomics. 2006 Aug 12;7:206. doi: 10.1186/1471-2164-7-206.
8
An integrated SSR map of grapevine based on five mapping populations.基于五个作图群体构建的葡萄综合SSR图谱。
Theor Appl Genet. 2006 Aug;113(3):369-82. doi: 10.1007/s00122-006-0295-1. Epub 2006 Jun 24.
9
10
Mapping QTLs for alpha-amylase activity in rye grain.黑麦籽粒α-淀粉酶活性的数量性状位点定位
J Appl Genet. 2005;46(2):115-23.
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