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PDBsum new things.

作者信息

Laskowski Roman A

机构信息

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

出版信息

Nucleic Acids Res. 2009 Jan;37(Database issue):D355-9. doi: 10.1093/nar/gkn860. Epub 2008 Nov 7.


DOI:10.1093/nar/gkn860
PMID:18996896
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2686501/
Abstract

PDBsum (http://www.ebi.ac.uk/pdbsum) provides summary information about each experimentally determined structural model in the Protein Data Bank (PDB). Here we describe some of its most recent features, including figures from the structure's key reference, citation data, Pfam domain diagrams, topology diagrams and protein-protein interactions. Furthermore, it now accepts users' own PDB format files and generates a private set of analyses for each uploaded structure.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/2c7e33d16b27/gkn860f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/57b648d83acc/gkn860f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/6a8e467d6fc5/gkn860f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/2c7e33d16b27/gkn860f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/57b648d83acc/gkn860f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/6a8e467d6fc5/gkn860f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d1/2686501/2c7e33d16b27/gkn860f3.jpg

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本文引用的文献

[1]
The universal protein resource (UniProt).

Nucleic Acids Res. 2008-1

[2]
A comparative view at comprehensive information resources on three-dimensional structures of biological macro-molecules.

Brief Funct Genomic Proteomic. 2007-9

[3]
Enhancing the functional annotation of PDB structures in PDBsum using key figures extracted from the literature.

Bioinformatics. 2007-7-15

[4]
The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution.

Nucleic Acids Res. 2007-1

[5]
E-MSD: improving data deposition and structure quality.

Nucleic Acids Res. 2006-1-1

[6]
Pfam: clans, web tools and services.

Nucleic Acids Res. 2006-1-1

[7]
PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids.

Nucleic Acids Res. 2005-1-1

[8]
Crystal structure of UAP56, a DExD/H-box protein involved in pre-mRNA splicing and mRNA export.

Structure. 2004-8

[9]
Announcing the worldwide Protein Data Bank.

Nat Struct Biol. 2003-12

[10]
MMDB: Entrez's 3D-structure database.

Nucleic Acids Res. 2003-1-1

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