Yamanaka Kazuya, Maruyama Chitose, Takagi Hiroshi, Hamano Yoshimitsu
Yokohama Research Center, Chisso Corporation, 5-1 Ookawa, Kanazawa-Ku, Yokohama 236-8605, Japan.
Nat Chem Biol. 2008 Dec;4(12):766-72. doi: 10.1038/nchembio.125. Epub 2008 Nov 9.
Epsilon-Poly-L-lysine (epsilon-PL) consists of 25-35 L-lysine residues in isopeptide linkages and is one of only two amino acid homopolymers known in nature. Elucidating the biosynthetic mechanism of epsilon-PL should open new avenues for creating novel classes of biopolymers. Here we report the purification of an epsilon-PL synthetase (Pls; 130 kDa) and the cloning of its gene from an epsilon-PL-producing strain of Streptomyces albulus. Pls was found to be a membrane protein with adenylation and thiolation domains characteristic of the nonribosomal peptide synthetases (NRPSs). It had no traditional condensation or thioesterase domain; instead, it had six transmembrane domains surrounding three tandem soluble domains. These tandem domains iteratively catalyzed L-lysine polymerization using free L-lysine polymer (or monomer in the initial reaction) as acceptor and Pls-bound L-lysine as donor, directly yielding chains of diverse length. Thus, Pls is a new single-module NRPS having an amino acid ligase-like catalytic activity for peptide bond formation.
ε-聚-L-赖氨酸(ε-PL)由25至35个以异肽键连接的L-赖氨酸残基组成,是自然界中已知的仅有的两种氨基酸同聚物之一。阐明ε-PL的生物合成机制应为新型生物聚合物的创造开辟新途径。在此,我们报道了从白色链霉菌的ε-PL产生菌株中纯化出一种ε-PL合成酶(Pls;130 kDa)并克隆了其基因。发现Pls是一种具有非核糖体肽合成酶(NRPSs)特征性腺苷化和硫醇化结构域的膜蛋白。它没有传统的缩合或硫酯酶结构域;相反,它有围绕三个串联可溶性结构域的六个跨膜结构域。这些串联结构域使用游离的L-赖氨酸聚合物(或初始反应中的单体)作为受体,以与Pls结合的L-赖氨酸作为供体,反复催化L-赖氨酸聚合,直接产生不同长度的链。因此,Pls是一种新型的单模块NRPS,具有类似氨基酸连接酶的催化肽键形成的活性。