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本文引用的文献

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Modeling how many envelope glycoprotein trimers per virion participate in human immunodeficiency virus infectivity and its neutralization by antibody.模拟每个病毒体中有多少包膜糖蛋白三聚体参与人类免疫缺陷病毒的感染性及其抗体中和作用。
Virology. 2007 Dec 20;369(2):245-62. doi: 10.1016/j.virol.2007.06.044. Epub 2007 Sep 7.
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Electron tomography of the contact between T cells and SIV/HIV-1: implications for viral entry.T细胞与SIV/HIV-1接触的电子断层扫描:对病毒进入的影响
PLoS Pathog. 2007 May 4;3(5):e63. doi: 10.1371/journal.ppat.0030063.
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Stoichiometry of murine leukemia virus envelope protein-mediated fusion and its neutralization.鼠白血病病毒包膜蛋白介导的融合及其中和的化学计量学
J Virol. 2006 Dec;80(24):11982-90. doi: 10.1128/JVI.01318-06. Epub 2006 Oct 11.
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Antibody binding is a dominant determinant of the efficiency of human immunodeficiency virus type 1 neutralization.抗体结合是1型人类免疫缺陷病毒中和效率的主要决定因素。
J Virol. 2006 Nov;80(22):11404-8. doi: 10.1128/JVI.01102-06. Epub 2006 Sep 6.
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Modulation of virion incorporation of Ebolavirus glycoprotein: effects on attachment, cellular entry and neutralization.埃博拉病毒糖蛋白在病毒粒子中的掺入调节:对附着、细胞进入和中和的影响。
Virology. 2006 Sep 1;352(2):345-56. doi: 10.1016/j.virol.2006.04.038. Epub 2006 Jun 13.
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Distribution and three-dimensional structure of AIDS virus envelope spikes.艾滋病病毒包膜刺突的分布及三维结构
Nature. 2006 Jun 15;441(7095):847-52. doi: 10.1038/nature04817. Epub 2006 May 24.
7
Dominant-negative effect of hetero-oligomerization on the function of the human immunodeficiency virus type 1 envelope glycoprotein complex.异源寡聚化对人类免疫缺陷病毒1型包膜糖蛋白复合体功能的显性负效应。
Virology. 2006 Jul 20;351(1):121-32. doi: 10.1016/j.virol.2006.03.003. Epub 2006 Apr 17.
8
Subunit stoichiometry of human immunodeficiency virus type 1 envelope glycoprotein trimers during virus entry into host cells.1型人类免疫缺陷病毒包膜糖蛋白三聚体在病毒进入宿主细胞过程中的亚基化学计量学
J Virol. 2006 May;80(9):4388-95. doi: 10.1128/JVI.80.9.4388-4395.2006.
9
Stoichiometry of envelope glycoprotein trimers in the entry of human immunodeficiency virus type 1.1型人类免疫缺陷病毒进入过程中包膜糖蛋白三聚体的化学计量学
J Virol. 2005 Oct;79(19):12132-47. doi: 10.1128/JVI.79.19.12132-12147.2005.
10
HIV-1 envelope pseudotyped viral vectors and infectious molecular clones expressing the same envelope glycoprotein have a similar neutralization phenotype, but culture in peripheral blood mononuclear cells is associated with decreased neutralization sensitivity.表达相同包膜糖蛋白的HIV-1包膜假型病毒载体和感染性分子克隆具有相似的中和表型,但在外周血单核细胞中培养与中和敏感性降低有关。
Virology. 2005 Sep 1;339(2):226-38. doi: 10.1016/j.virol.2005.06.003.

估算人类免疫缺陷病毒进入的化学计量学。

Estimating the stoichiometry of human immunodeficiency virus entry.

作者信息

Magnus Carsten, Rusert Peter, Bonhoeffer Sebastian, Trkola Alexandra, Regoes Roland R

机构信息

Integrative Biology, ETH Zurich, Zurich, Switzerland.

出版信息

J Virol. 2009 Feb;83(3):1523-31. doi: 10.1128/JVI.01764-08. Epub 2008 Nov 19.

DOI:10.1128/JVI.01764-08
PMID:19019953
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2620894/
Abstract

To enter target cells, human immunodeficiency virus (HIV) first attaches to the cells and fuses with the cell membrane. Attachment and fusion involve envelope glycoprotein trimers on the surface of the virion and the CD4 receptor and chemokine coreceptors on the surface of the target cell. The stoichiometry of entry, that is, the number of bonds between such trimers and CD4 that are required for infection, is unknown. Pseudotyped virions that express mixed trimers consisting of functional and nonfunctional envelope proteins have been used to study how many trimer-receptor interactions are required for virus entry. However, to extract information on the stoichiometry of entry from data generated in in vitro infectivity assays with such viruses, mathematical models are required. Here, we describe mathematical models that can be used to infer the stoichiometry of entry. By fitting our simplest model to previously published data (X. Yang, S. Kurteva, X. Ren, S. Lee, and J. Sodroski, J. Virol. 79: 12132-12147, 2005), we estimated that the number of trimer-receptor interactions required for HIV to infect a target cell is approximately eight, which is higher than previous estimates. We also consider model extensions that explain some systematic deviations of the data from the prediction of the simplest model. However, these extended models yield very different estimates of the stoichiometry of entry ranging from 2 to 19. These results strongly suggest that, based on our present knowledge of HIV entry, the stoichiometry of this process cannot be reliably estimated. Our study identifies parameters that need to be defined to render the estimation of the stoichiometry of HIV entry possible.

摘要

为了进入靶细胞,人类免疫缺陷病毒(HIV)首先附着于细胞并与细胞膜融合。附着和融合涉及病毒体表面的包膜糖蛋白三聚体以及靶细胞表面的CD4受体和趋化因子共受体。感染所需的此类三聚体与CD4之间的键数,即进入的化学计量比尚不清楚。表达由功能性和非功能性包膜蛋白组成的混合三聚体的假型病毒体已被用于研究病毒进入需要多少三聚体 - 受体相互作用。然而,要从使用此类病毒的体外感染性试验所产生的数据中提取有关进入化学计量比的信息,需要数学模型。在这里,我们描述了可用于推断进入化学计量比的数学模型。通过将我们最简单的模型拟合到先前发表的数据(X. Yang,S. Kurteva,X. Ren,S. Lee和J. Sodroski,J. Virol. 79:12132 - 12147,2005),我们估计HIV感染靶细胞所需的三聚体 - 受体相互作用数约为8,这高于先前的估计。我们还考虑了模型扩展,这些扩展解释了数据与最简单模型预测之间的一些系统偏差。然而,这些扩展模型对进入化学计量比的估计差异很大,范围从2到19。这些结果强烈表明,基于我们目前对HIV进入的了解,这个过程的化学计量比无法可靠估计。我们的研究确定了为使HIV进入化学计量比的估计成为可能而需要定义的参数。