Williams Tom A, Wolfe Kenneth H, Fares Mario A
Department of Genetics, Smurfit Institute of Genetics, University of Dublin, Trinity College, Dublin, Ireland.
Mol Biol Evol. 2009 Feb;26(2):445-50. doi: 10.1093/molbev/msn267. Epub 2008 Nov 26.
Aminoacyl tRNA synthetases (aaRS) are crucial enzymes that join amino acids to their cognate tRNAs, thereby implementing the genetic code. These enzymes fall into two unrelated structural classes whose evolution has not been explained. The leading hypothesis, proposed by Rodin and Ohno, is that the two classes originated as a pair of sense-antisense genes encoded on opposite strands of a single DNA molecule. This unusual idea obtained its main support from reports of a "Rosetta stone": a locus where genes for heat shock protein 70 (HSP70) and an Nicotinamide adenine dinulecotide-specific glutamate dehydrogenase (NAD-GDH), which are structurally homologous to the two classes of aaRS, overlap extensively on complementary DNA strands. This remarkable locus was first characterized in the oomycete Achlya klebsiana and has since been reported in many other species. Here we present evidence that the open reading frames on the antisense strand of HSP70 genes are spurious, and we identify a more probable candidate for the gene encoding the oomycete NAD-GDH enzyme. These results cast extensive doubt on the Rosetta Stone argument.
氨酰-tRNA合成酶(aaRS)是至关重要的酶,它们将氨基酸与其对应的tRNA连接起来,从而实现遗传密码的翻译。这些酶分为两个不相关的结构类别,其进化过程尚未得到解释。由罗丁(Rodin)和大野(Ohno)提出的主流假说是,这两个类别起源于编码在单个DNA分子相反链上的一对正义-反义基因。这个不同寻常的观点主要得到了“罗塞塔石碑”报道的支持:一个位点,热休克蛋白70(HSP70)基因和烟酰胺腺嘌呤二核苷酸特异性谷氨酸脱氢酶(NAD-GDH)基因在互补DNA链上广泛重叠,这两个基因在结构上与两类aaRS同源。这个显著的位点最初是在卵菌纲的克氏壶菌(Achlya klebsiana)中被鉴定出来的,此后在许多其他物种中也有报道。在这里,我们提供证据表明HSP70基因反义链上的开放阅读框是假的,并且我们鉴定出了一个更有可能编码卵菌纲NAD-GDH酶的基因候选者。这些结果对罗塞塔石碑的论点提出了广泛质疑。