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斑马鱼中的己糖激酶基因家族:结构、表达、功能及系统发育分析。

The hexokinase gene family in the zebrafish: structure, expression, functional and phylogenetic analysis.

作者信息

González-Alvarez Rafael, Ortega-Cuellar Daniel, Hernández-Mendoza Armando, Moreno-Arriola Elizabeth, Villaseñor-Mendoza Karina, Gálvez-Mariscal Amanda, Pérez-Cruz María Estela, Morales-Salas Ignacio, Velázquez-Arellano Antonio

机构信息

Unidad de Genética de la Nutrición, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México and Instituto Nacional de Pediatría, México City, Mexico.

出版信息

Comp Biochem Physiol B Biochem Mol Biol. 2009 Feb;152(2):189-95. doi: 10.1016/j.cbpb.2008.11.004. Epub 2008 Dec 3.

Abstract

Hexokinase-catalyzed glucose phosphorylation is the first and crucial step for glucose utilization. Although there are reported studies on glucose metabolism in commercial species, knowledge on it is almost nil in zebrafish (Danio rerio), an important model organism for biological research. We have searched these fish hexokinase genes by BLAST analysis; determined their expression in liver, muscle, brain and heart; measured their response to fasting and glucose administration; and performed homology sequences studies to glimpse their evolutionary history. We have confirmed by RT-qPCR studies that the six DNA sequences annotated as possible hexokinases in the NCBI GenBank are transcribed. The organ distribution of the HXK genes is similar in zebrafish as in mammals, to which they are distantly related. Of these, DrGLK and DrSHXK1 are expressed in the fish liver, DrHXK1 in brain and heart, and DrHXK2 in muscle. The only gene responsive to glucose was liver DrGLK. Its expression is induced approximately 1 h after glucose intraperitoneal injection, but not after saline solution injection. The comparison of the fish sequences and the corresponding mammalian ones imply that in both taxa the main muscle and brain isoforms are fusion products of the ancestral gene, their amino halves having separated before than their carboxy ones, followed by the fusion event, whereas fish and mammalian glucokinase genes remained unduplicated.

摘要

己糖激酶催化的葡萄糖磷酸化是葡萄糖利用的第一步也是关键步骤。尽管已有关于商业养殖物种葡萄糖代谢的报道研究,但对于斑马鱼(Danio rerio)这一生物学研究的重要模式生物,相关知识几乎为零。我们通过BLAST分析搜索了这些鱼类的己糖激酶基因;确定了它们在肝脏、肌肉、脑和心脏中的表达;测量了它们对禁食和葡萄糖给药的反应;并进行了同源序列研究以了解它们的进化历史。我们通过RT-qPCR研究证实,NCBI基因库中注释为可能的己糖激酶的六个DNA序列被转录。斑马鱼中己糖激酶基因的器官分布与它们亲缘关系较远的哺乳动物相似。其中,DrGLK和DrSHXK1在鱼肝中表达,DrHXK1在脑和心脏中表达,DrHXK2在肌肉中表达。唯一对葡萄糖有反应的基因是肝脏中的DrGLK。腹腔注射葡萄糖后约1小时其表达被诱导,但注射盐溶液后则无此现象。鱼类序列与相应哺乳动物序列的比较表明,在这两个分类群中,主要的肌肉和脑同工型都是祖先基因的融合产物,它们的氨基端比羧基端先分开,随后发生融合事件,而鱼类和哺乳动物的葡萄糖激酶基因仍未重复。

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