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核糖体惊人立体化学的生物学意义。

Biological implications of the ribosome's stunning stereochemistry.

作者信息

Zimmerman Ella, Yonath Ada

机构信息

Department of Structural Biology, Weizmann Institute of Science, 76100 Rehovot, Israel.

出版信息

Chembiochem. 2009 Jan 5;10(1):63-72. doi: 10.1002/cbic.200800554.

Abstract

The ribosome's striking architecture is ingeniously designed for its efficient polymerase activity in the biosynthesis of proteins, which is a prerequisite for cell vitality. This elaborate architecture is comprised of a universal symmetrical region that connects all of the ribosomal functional centers involved in protein biosynthesis. Assisted by the mobility of selected ribosomal nucleotides, the symmetrical region provides the structural tools that are required not only for peptide bond formation, but also for fast and smooth successive elongation of nascent proteins. It confines the path along which the A-tRNA 3'-end is rotated into the P-site in concert with the overall tRNA/mRNA sideways movement, thus providing the required stereochemistry for peptide bond formation and substrate-mediated catalysis. The extreme flexibility of the nucleotides that facilitate peptide bond formation is being exploited to promote antibiotic selectivity and synergism, as well as to combat antibiotic resistance.

摘要

核糖体引人注目的结构是为其在蛋白质生物合成中高效的聚合酶活性而巧妙设计的,这是细胞活力的先决条件。这种精巧的结构由一个通用对称区域组成,该区域连接了参与蛋白质生物合成的所有核糖体功能中心。在选定的核糖体核苷酸的移动性辅助下,对称区域提供了不仅用于肽键形成,而且用于新生蛋白质快速平稳连续延伸所需的结构工具。它限制了A-tRNA 3'-末端与整体tRNA/mRNA侧向移动协同旋转到P位点的路径,从而为肽键形成和底物介导的催化提供所需的立体化学。促进肽键形成的核苷酸的极端灵活性正被用于提高抗生素的选择性和协同作用,以及对抗抗生素耐药性。

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