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肉葡萄球菌氧传感器激酶NreB中一个带有对氧不稳定的[4Fe-4S](2+)簇的PAS结构域。

A PAS domain with an oxygen labile [4Fe-4S](2+) cluster in the oxygen sensor kinase NreB of Staphylococcus carnosus.

作者信息

Müllner Martin, Hammel Oliver, Mienert Bernd, Schlag Steffen, Bill Eckhard, Unden Gottfried

机构信息

Institut fur Mikrobiologie and Weinforschung, Universitat Mainz, Becherweg 15, 55099 Mainz, Germany.

出版信息

Biochemistry. 2008 Dec 30;47(52):13921-32. doi: 10.1021/bi8014086.

DOI:10.1021/bi8014086
PMID:19102705
Abstract

The cytoplasmic histidine sensor kinase NreB of Staphylococcus carnosus responds to O(2) and controls together with the response regulator NreC the expression of genes of nitrate/nitrite respiration. nreBC homologous genes were found in Staphylococcus strains and Bacillus clausii, and a modified form was found in some Lactobacillus strains. NreB contains a sensory domain with similarity to heme B binding PAS domains. Anaerobically prepared NreB of S. carnosus exhibited a (diamagnetic) 4Fe-4S cluster when assessed by Mossbauer spectroscopy. Upon reaction with air, the cluster was degraded with a half-life of approximately 2.5 min. No significant amounts of Mossbauer or EPR detectable intermediates were found during the decay, but magnetic Mossbauer spectra revealed formation of diamagnetic 2Fe-2S clusters. After extended exposure to air, NreB was devoid of a FeS cluster. Photoreduction with deazaflavin produced small amounts of 4Fe-4S, which were degraded subsequently. The magnetically perturbed Mossbauer spectrum of the 4Fe-4S cluster corroborated the S = 0 spin state and revealed uniform electric field gradient tensors of the iron sites, suggesting full delocalization of the valence electrons and binding of each of the Fe ions by four S ligands, including the ligand to the protein. Mutation of each of the four Cys residues inactivated NreB function in vivo in accordance with their role as ligands. 4Fe-4S cluster-containing NreB had high kinase activity. Exposure to air decreased the kinase activity and content of the 4Fe-4S cluster with similar half-lives. We conclude that the sensory domain of NreB represents a new type of PAS domain containing a 4Fe-4S cluster for sensing and function.

摘要

肉葡萄球菌的细胞质组氨酸传感激酶NreB对氧气作出反应,并与反应调节因子NreC共同控制硝酸盐/亚硝酸盐呼吸相关基因的表达。在葡萄球菌菌株和克劳氏芽孢杆菌中发现了nreBC同源基因,在一些乳酸杆菌菌株中发现了其修饰形式。NreB包含一个与血红素B结合PAS结构域相似的传感结构域。通过穆斯堡尔光谱评估,厌氧制备的肉葡萄球菌NreB呈现出(抗磁性的)4Fe-4S簇。与空气反应后,该簇以约2.5分钟的半衰期降解。在衰变过程中未发现大量穆斯堡尔或电子顺磁共振可检测的中间体,但磁性穆斯堡尔光谱显示形成了抗磁性的2Fe-2S簇。长时间暴露于空气中后,NreB不含FeS簇。用脱氮黄素进行光还原产生少量的4Fe-4S,随后它们被降解。4Fe-4S簇的磁性扰动穆斯堡尔光谱证实了S = 0自旋态,并揭示了铁位点均匀的电场梯度张量,表明价电子完全离域,每个铁离子由四个硫配体结合,包括与蛋白质的配体。四个半胱氨酸残基中的每一个发生突变都会使NreB在体内的功能失活,这与其作为配体的作用一致。含有4Fe-4S簇的NreB具有高激酶活性。暴露于空气中会降低激酶活性和4Fe-4S簇含量,且半衰期相似。我们得出结论,NreB的传感结构域代表了一种新型的PAS结构域,其包含用于传感和功能的4Fe-4S簇。

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