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花生中一组独特的干旱诱导基因的鉴定及其功能验证,这些基因在对逐渐的水分胁迫作出反应时优先表达。

Identification and functional validation of a unique set of drought induced genes preferentially expressed in response to gradual water stress in peanut.

作者信息

Govind Geetha, Harshavardhan Vokkaliga ThammeGowda, Patricia Jayaker Kalaiarasi, Dhanalakshmi Ramachandra, Senthil Kumar Muthappa, Sreenivasulu Nese, Udayakumar Makarla

机构信息

Department of Crop Physiology, University of Agricultural Sciences, GKVK, Bangalore, 560 065, Karnataka, India.

出版信息

Mol Genet Genomics. 2009 Jun;281(6):591-605. doi: 10.1007/s00438-009-0432-z. Epub 2009 Feb 18.

Abstract

Peanut, found to be relatively drought tolerant crop, has been the choice of study to characterize the genes expressed under gradual water deficit stress. Nearly 700 genes were identified to be enriched in subtractive cDNA library from gradual process of drought stress adaptation. Further, expression of the drought inducible genes related to various signaling components and gene sets involved in protecting cellular function has been described based on dot blot experiments. Fifty genes (25 regulators and 25 functional related genes) selected based on dot blot experiments were tested for their stress responsiveness using northern blot analysis and confirmed their nature of differential regulation under different field capacity of drought stress treatments. ESTs generated from this subtracted cDNA library offered a rich source of stress-related genes including signaling components. Additional 50% uncharacterized sequences are noteworthy. Insights gained from this study would provide the foundation for further studies to understand the question of how peanut plants are able to adapt to naturally occurring harsh drought conditions. At present functional validation cannot be deemed in peanut, hence as a proof of concept seven orthologues of drought induced genes of peanut have been silenced in heterologous N. benthamiana system, using virus induced gene silencing method. These results point out the functional importance for HSP70 gene and key regulators such as Jumonji in drought stress response.

摘要

花生被发现是一种相对耐旱的作物,一直是研究在逐渐缺水胁迫下表达基因的选择对象。在干旱胁迫适应的渐进过程中,近700个基因被鉴定为在消减cDNA文库中富集。此外,基于斑点杂交实验描述了与各种信号成分和参与保护细胞功能的基因集相关的干旱诱导基因的表达。基于斑点杂交实验选择的50个基因(25个调节基因和25个功能相关基因),通过Northern杂交分析测试了它们的胁迫反应性,并证实了它们在不同田间持水量的干旱胁迫处理下的差异调节性质。从这个消减cDNA文库产生的ESTs提供了丰富的胁迫相关基因来源,包括信号成分。另外50%未表征的序列值得注意。本研究获得的见解将为进一步研究花生植物如何能够适应自然发生的恶劣干旱条件的问题奠定基础。目前在花生中无法进行功能验证,因此作为概念验证,利用病毒诱导基因沉默方法,在异源本氏烟草系统中沉默了花生7个干旱诱导基因的直系同源基因。这些结果指出了HSP70基因和关键调节因子如Jumonji在干旱胁迫反应中的功能重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f53/2757612/1c713448a395/438_2009_432_Fig1_HTML.jpg

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