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孤立的残余种群还是近期引入的?通过遗传分析和瓶颈效应模拟来估计耶林博利德比特袋貂的来源

Isolated remnant or recent introduction? Estimating the provenance of Yellingbo leadbeater's possums by genetic analysis and bottleneck simulation.

作者信息

Hansen Birgita D, Taylor Andrea C

机构信息

Australian Centre for Biodiversity, School of Biological Sciences, Monash University, Victoria 3800, Australia.

出版信息

Mol Ecol. 2008 Sep;17(18):4039-52. doi: 10.1111/j.1365-294x.2008.03900.x.

Abstract

Effective conservation management requires that genetically divergent populations potentially harbouring important local adaptations be identified and maintained as separate management units. In the case of the endangered Australian Leadbeater's possum (Gymnobelideus leadbeateri), an arboreal marsupial endemic to Victoria, uncertainty over the evolutionary origin of a potentially important extant wild population recently discovered in atypical habitat (lowland swamp) at Yellingbo is hampering such efforts. The population is rumoured to be a recent introduction. Microsatellite allele frequencies at Yellingbo differed substantially from those in sampled populations in montane ash forest (F(ST) between 0.23 and 0.36), and Bayesian clustering analyses of genotypes strongly separated them (K = 2). We conducted a suite of bottlenecking tests which all indicated that Yellingbo had undergone a recent reduction in size. The extent to which the distinctiveness of Yellingbo animals might be expected solely through bottlenecking associated with a recent introduction, was tested by simulating population-history scenarios seeded with genotypes from candidate wild and captive sources. No bottleneck scenario reproduced anything approaching the genetic distinction of the Yellingbo population, with all STRUCTURE analyses placing Yellingbo in a separate cluster to simulated populations (K = 2, minimum F(ST) = 0.13). These results suggest that Yellingbo does not share recent ancestry with other extant populations and instead may be a remnant of an otherwise extinct gene pool. Importantly, this may include genes involved in adaptation to a lowland swamp environment, substantially adding to the conservation importance of this population, and suggesting that separate management may be prudent until evidence suggests otherwise.

摘要

有效的保护管理要求识别出可能具有重要局部适应性的基因差异种群,并将其作为单独的管理单元加以维护。就濒危的澳大利亚利德比特氏袋貂(Gymnobelideus leadbeateri)而言,这种树栖有袋动物是维多利亚州特有的,最近在耶林博非典型栖息地(低地沼泽)发现的一个可能具有重要意义的现存野生种群的进化起源存在不确定性,这阻碍了此类保护工作。有传言称该种群是近期引入的。耶林博的微卫星等位基因频率与山地灰林中采样种群的频率有很大差异(F(ST)在0.23至0.36之间),对基因型的贝叶斯聚类分析也将它们明显区分开来(K = 2)。我们进行了一系列瓶颈效应测试,所有测试都表明耶林博的种群数量近期有所减少。通过模拟以候选野生和圈养来源的基因型为种子的种群历史情景,测试了仅通过与近期引入相关的瓶颈效应来解释耶林博动物独特性的程度。没有任何瓶颈情景能重现接近耶林博种群遗传差异的情况,所有STRUCTURE分析都将耶林博置于与模拟种群不同的聚类中(K = 2,最小F(ST) = 0.13)。这些结果表明,耶林博与其他现存种群没有近期的共同祖先,相反,它可能是一个原本已灭绝的基因库的残余。重要的是,这可能包括参与适应低地沼泽环境的基因,这大大增加了该种群的保护重要性,并表明在有其他证据之前,采取单独管理措施可能是谨慎的。

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