Nikoh Naruo, Nakabachi Atsushi
Division of Natural Sciences, The Open University of Japan, Chiba, Japan.
BMC Biol. 2009 Mar 10;7:12. doi: 10.1186/1741-7007-7-12.
Aphids possess bacteriocytes, which are cells specifically differentiated to harbour the obligate mutualist Buchnera aphidicola (gamma-Proteobacteria). Buchnera has lost many of the genes that appear to be essential for bacterial life. From the bacteriocyte of the pea aphid Acyrthosiphon pisum, we previously identified two clusters of expressed sequence tags that display similarity only to bacterial genes. Southern blot analysis demonstrated that they are encoded in the aphid genome. In this study, in order to assess the possibility of lateral gene transfer, we determined the full-length sequences of these transcripts, and performed detailed structural and phylogenetic analyses. We further examined their expression levels in the bacteriocyte using real-time quantitative RT-PCR.
Sequence similarity searches demonstrated that these fully sequenced transcripts are significantly similar to the bacterial genes ldcA (product, LD-carboxypeptidase) and rlpA (product, rare lipoprotein A), respectively. Buchnera lacks these genes, whereas many other bacteria, including Escherichia coli, a close relative of Buchnera, possess both ldcA and rlpA. Molecular phylogenetic analysis clearly demonstrated that the aphid ldcA was derived from a rickettsial bacterium closely related to the extant Wolbachia spp. (alpha-Proteobacteria, Rickettsiales), which are intracellular symbionts of various lineages of arthropods. The evolutionary origin of rlpA was not fully resolved, but it was clearly demonstrated that its double-psi beta-barrel domain is of bacterial origin. Real-time quantitative RT-PCR demonstrated that ldcA and rlpA are expressed 11.6 and 154-fold higher in the bacteriocyte than in the whole body, respectively. LdcA is an enzyme required for recycling murein (peptidoglycan), which is a component of the bacterial cell wall. As Buchnera possesses a cell wall composed of murein but lacks ldcA, a high level of expression of the aphid ldcA in the bacteriocyte may be essential to maintain Buchnera. Although the function of RlpA is not well known, conspicuous up-regulation of the aphid rlpA in the bacteriocyte implies that this gene is also essential for Buchnera.
In this study, we obtained several lines of evidence indicating that aphids acquired genes from bacteria via lateral gene transfer and that these genes are used to maintain the obligately mutualistic bacterium, Buchnera.
蚜虫拥有含菌细胞,这些细胞是专门分化出来用以容纳专性共生菌蚜虫内共生菌(γ-变形菌纲)的细胞。蚜虫内共生菌已经丢失了许多对细菌生存似乎至关重要的基因。我们先前从豌豆蚜(豌豆蚜属)的含菌细胞中鉴定出两个表达序列标签簇,它们仅与细菌基因具有相似性。Southern印迹分析表明它们是由蚜虫基因组编码的。在本研究中,为了评估横向基因转移的可能性,我们确定了这些转录本的全长序列,并进行了详细的结构和系统发育分析。我们还使用实时定量逆转录PCR进一步检测了它们在含菌细胞中的表达水平。
序列相似性搜索表明,这些已完全测序的转录本分别与细菌基因ldcA(产物,LD-羧肽酶)和rlpA(产物,稀有脂蛋白A)具有显著相似性。蚜虫内共生菌缺乏这些基因,而许多其他细菌,包括与蚜虫内共生菌亲缘关系较近的大肠杆菌,同时拥有ldcA和rlpA。分子系统发育分析清楚地表明,蚜虫的ldcA源自一种与现存沃尔巴克氏体属(α-变形菌纲,立克次氏体目)密切相关的立克次氏体细菌,沃尔巴克氏体属是各种节肢动物谱系的细胞内共生菌。rlpA的进化起源尚未完全确定,但清楚地表明其双ψβ桶结构域起源于细菌。实时定量逆转录PCR表明,ldcA和rlpA在含菌细胞中的表达分别比在整个虫体中高11.6倍和154倍。LdcA是回收胞壁质(肽聚糖)所必需的一种酶,胞壁质是细菌细胞壁