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浮萍科叶绿体rpS16内含子序列分析

[Analysis of chloroplast rpS16 intron sequences in Lemnaceae].

作者信息

Martirosian E V, Ryzhova N N, Kochieva E Z, Skriabin K G

出版信息

Mol Biol (Mosk). 2009 Jan-Feb;43(1):36-43.

Abstract

Chloroplast rpS16 gene intron sequences were determined and characterized for twenty-five Lemnaceae accessions representing nine duckweed species. For each Lemnaceae species nucleotide substitutions and for Lemna minor, Lemna aequinoctialis, Wolffia arrhiza different indels were detected. Most of indels were found for Wolffia arrhiza and Lemna aequinoctialis. The analyses of intraspecific polymorphism resulted in identification of several gaplotypes in L. gibba and L. trisulca. Lemnaceae phylogenetic relationship based on rpS16 intron variability data has revealed significant differences between L. aequinoctialis and other Lemna species. Genetic distance values corroborated competence of Landoltia punctata separations from Spirodela into an independent generic taxon. The acceptability of rpS16 intron sequences for phylogenetic studies in Lemnaceae was shown.

摘要

测定并表征了代表9个浮萍物种的25个浮萍科种质的叶绿体rpS16基因内含子序列。对于每个浮萍科物种,检测到了核苷酸替换,并且在小浮萍、赤道浮萍、无根萍中检测到了不同的插入缺失。大部分插入缺失出现在无根萍和赤道浮萍中。种内多态性分析在菱叶浮萍和三裂浮萍中鉴定出了几种间隙单倍型。基于rpS16内含子变异性数据的浮萍科系统发育关系揭示了赤道浮萍与其他浮萍物种之间的显著差异。遗传距离值证实了斑点兰氏萍从紫萍中分离成为一个独立属分类单元的合理性。结果表明rpS16内含子序列可用于浮萍科的系统发育研究。

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