Barklis Eric, Alfadhli Ayna, McQuaw Carolyn, Yalamuri Suraj, Still Amelia, Barklis Robin Lid, Kukull Ben, López Claudia S
Vollum Institute and Department of Molecular Microbiology and Immunology, Oregon Health and Sciences University, Mail Code L220, 3181 SW Sam Jackson Park Road, Portland, OR 97201-3098, USA.
J Mol Biol. 2009 Mar 27;387(2):376-89. doi: 10.1016/j.jmb.2009.01.058. Epub 2009 Feb 3.
During the morphogenesis of mature human immunodeficiency virus-1 cores, viral capsid proteins assemble conical or tubular shells around viral ribonucleoprotein complexes. This assembly step is mimicked in vitro through reactions in which capsid proteins oligomerize to form long tubes, and this process can be modeled as consisting of a slow nucleation period, followed by a rapid phase of tube growth. We have developed a novel fluorescence microscopy approach to monitor in vitro assembly reactions and have employed it, along with electron microscopy analysis, to characterize the assembly process. Our results indicate that temperature, salt concentration, and pH changes have differential effects on tube nucleation and growth steps. We also demonstrate that assembly can be unidirectional or bidirectional, that growth can be capped, and that proteins can assemble onto the surfaces of tubes, yielding multiwalled or nested structures. Finally, experiments show that a peptide inhibitor of in vitro assembly also can dismantle preexisting tubes, suggesting that such reagents may possess antiviral effects against both viral assembly and uncoating. Our investigations help establish a basis for understanding the mechanism of mature human immunodeficiency virus-1 core assembly and avenues for antiviral inhibition.
在成熟的人类免疫缺陷病毒1型核心的形态发生过程中,病毒衣壳蛋白围绕病毒核糖核蛋白复合体组装成锥形或管状外壳。这一组装步骤在体外通过衣壳蛋白寡聚形成长管的反应得以模拟,并且这个过程可以被建模为由一个缓慢的成核期,接着是一个快速的管生长阶段组成。我们开发了一种新型荧光显微镜方法来监测体外组装反应,并将其与电子显微镜分析一起用于表征组装过程。我们的结果表明,温度、盐浓度和pH值变化对管的成核和生长步骤有不同的影响。我们还证明组装可以是单向的或双向的,生长可以被封端,并且蛋白质可以组装到管的表面,产生多层或嵌套结构。最后,实验表明一种体外组装的肽抑制剂也可以拆解预先存在的管,这表明此类试剂可能对病毒组装和解聚都具有抗病毒作用。我们的研究有助于为理解成熟的人类免疫缺陷病毒1型核心组装机制以及抗病毒抑制途径奠定基础。