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可行的sup45 STOP突变的悖论:蛋白质的翻译通读、活性和稳定性之间的必要平衡。

The paradox of viable sup45 STOP mutations: a necessary equilibrium between translational readthrough, activity and stability of the protein.

作者信息

Kiktev Denis, Moskalenko Svetlana, Murina Olga, Baudin-Baillieu Agnès, Rousset Jean-Pierre, Zhouravleva Galina

机构信息

Department of Genetics and Breeding, St Petersburg State University, Universitetskaya emb. 7/9, 199034 St Petersburg, Russia.

出版信息

Mol Genet Genomics. 2009 Jul;282(1):83-96. doi: 10.1007/s00438-009-0447-5. Epub 2009 Apr 16.

DOI:10.1007/s00438-009-0447-5
PMID:19370360
Abstract

The mechanisms leading to non-lethality of nonsense mutations in essential genes are poorly understood. Here, we focus on the factors influencing viability of yeast cells bearing premature termination codons (PTCs) in the essential gene SUP45 encoding translation termination factor eRF1. Using a dual reporter system we compared readthrough efficiency of the natural termination codon of SUP45 gene, spontaneous sup45-n (nonsense) mutations, nonsense mutations obtained by site-directed mutagenesis (76Q --> TAA, 242R --> TGA, 317L --> TAG). The nonsense mutations in SUP45 gene were shown to be situated in moderate contexts for readthrough efficiency. We showed that readthrough efficiency of some of the mutations present in the sup45 mutants is not correlated with full-length Sup45 protein amount. This resulted from modification of both sup45 mRNA stability which varies 3-fold among sup45-n mutants and degradation rate of mutant Sup45 proteins. Our results demonstrate that some substitutions in the place of PTCs decrease Sup45 stability. The viability of sup45 nonsense mutants is therefore supported by diverse mechanisms that control the final amount of functional Sup45 in cells.

摘要

导致必需基因中无义突变不致死的机制目前尚不清楚。在此,我们聚焦于影响在编码翻译终止因子eRF1的必需基因SUP45中携带提前终止密码子(PTC)的酵母细胞生存能力的因素。我们使用双报告系统比较了SUP45基因天然终止密码子的通读效率、自发的sup45 - n(无义)突变、通过定点诱变获得的无义突变(76Q→TAA、242R→TGA、317L→TAG)。结果表明,SUP45基因中的无义突变处于通读效率的中等环境中。我们发现,sup45突变体中存在的一些突变的通读效率与全长Sup45蛋白量无关。这是由于sup45 mRNA稳定性的改变(在sup45 - n突变体中变化3倍)以及突变型Sup45蛋白的降解速率所致。我们的结果表明,PTC位置的一些替换会降低Sup45的稳定性。因此,sup45无义突变体的生存能力受到多种机制的支持,这些机制控制着细胞中功能性Sup45的最终量。

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本文引用的文献

1
Prion-dependent lethality of sup45 mutants in Saccharomyces cerevisiae.酿酒酵母中sup45突变体的朊病毒依赖性致死性。
Prion. 2007 Apr-Jun;1(2):136-43. doi: 10.4161/pri.1.2.4533. Epub 2007 Apr 4.
2
PTC124 is an orally bioavailable compound that promotes suppression of the human CFTR-G542X nonsense allele in a CF mouse model.PTC124是一种口服生物利用度良好的化合物,在囊性纤维化(CF)小鼠模型中可促进对人CFTR - G542X无义等位基因的抑制作用。
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Whole genome sequencing data and analyses of the underlying transcriptional regulation for a nonsense suppressor mutant.全基因组测序数据以及对一个无义抑制突变体潜在转录调控的分析。
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RNA. 2012 Dec;18(12):2320-34. doi: 10.1261/rna.035113.112. Epub 2012 Oct 25.
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Autoregulatory systems controlling translation factor expression: thermostat-like control of translational accuracy.自动调节系统控制翻译因子表达:对翻译准确性的类似恒温器的控制。
RNA. 2010 Apr;16(4):655-63. doi: 10.1261/rna.1796210. Epub 2010 Feb 25.
[酿酒酵母中SUP45基因的可行无义突变体在温度升高时具有致死性]
Genetika. 2007 Oct;43(10):1363-71.
4
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BMC Mol Biol. 2007 Aug 16;8:71. doi: 10.1186/1471-2199-8-71.
5
Quantification of protein half-lives in the budding yeast proteome.芽殖酵母蛋白质组中蛋白质半衰期的定量分析。
Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):13004-9. doi: 10.1073/pnas.0605420103. Epub 2006 Aug 17.
6
[Increased tRNA concentration in yeast containing mutant termination translation factors eRF1 and eRF3].[含有突变型终止翻译因子eRF1和eRF3的酵母中tRNA浓度增加]
Mol Biol (Mosk). 2006 Jul-Aug;40(4):724-30.
7
Comparison of characteristics and function of translation termination signals between and within prokaryotic and eukaryotic organisms.原核生物和真核生物之间以及内部翻译终止信号的特征与功能比较。
Nucleic Acids Res. 2006 Apr 13;34(7):1959-73. doi: 10.1093/nar/gkl074. Print 2006.
8
Involvement of human release factors eRF3a and eRF3b in translation termination and regulation of the termination complex formation.人类释放因子eRF3a和eRF3b参与翻译终止及终止复合物形成的调控。
Mol Cell Biol. 2005 Jul;25(14):5801-11. doi: 10.1128/MCB.25.14.5801-5811.2005.
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