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通过纳米孔对单个蛋白质进行分析:挑战与机遇

Interrogating single proteins through nanopores: challenges and opportunities.

作者信息

Movileanu Liviu

机构信息

Department of Physics, Syracuse University, 201 Physics Building, Syracuse, NY 13244-1130, USA.

出版信息

Trends Biotechnol. 2009 Jun;27(6):333-41. doi: 10.1016/j.tibtech.2009.02.008. Epub 2009 Apr 23.

DOI:10.1016/j.tibtech.2009.02.008
PMID:19394097
Abstract

A single nanopore represents an amazingly versatile single-molecule probe that can be employed to reveal several important features of polypeptides, such as their folding state, backbone flexibility, mechanical stability, binding affinity to other interacting ligands and enzymatic activity. Moreover, groundwork in this area using engineered protein nanopores has demonstrated new opportunities for discovering the biophysical rules that govern the transport of proteins through transmembrane protein pores. In this review, I summarize the current knowledge in the field and discuss how nanopore probe techniques will provide a new generation of research tools in nanomedicine for quantitatively examining the details of complex recognition and, furthermore, will represent a crucial step in designing other pore-based nanostructures and high-throughput devices for molecular biomedical diagnosis.

摘要

单个纳米孔是一种极其通用的单分子探针,可用于揭示多肽的几个重要特征,如它们的折叠状态、主链柔韧性、机械稳定性、与其他相互作用配体的结合亲和力以及酶活性。此外,利用工程化蛋白质纳米孔在该领域的基础研究为发现控制蛋白质通过跨膜蛋白孔运输的生物物理规则带来了新机遇。在这篇综述中,我总结了该领域的现有知识,并讨论了纳米孔探针技术如何为纳米医学提供新一代研究工具,用于定量研究复杂识别的细节,此外,还将代表设计其他基于孔的纳米结构和用于分子生物医学诊断的高通量设备的关键一步。

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1
Interrogating single proteins through nanopores: challenges and opportunities.通过纳米孔对单个蛋白质进行分析:挑战与机遇
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2
Forming an alpha-hemolysin nanopore for single-molecule analysis.形成用于单分子分析的α-溶血素纳米孔。
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Nanopore sequencing technology: nanopore preparations.纳米孔测序技术:纳米孔制备
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Biological nanopores for single-molecule biophysics.用于单分子生物物理学的生物纳米孔
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Nanopore sequencing technology: research trends and applications.纳米孔测序技术:研究趋势与应用
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Capture of a single molecule in a nanocavity.在纳米腔中捕获单个分子。
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The end of single-molecule envy.单分子羡慕的终结。
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DNA counterion current and saturation examined by a MEMS-based solid state nanopore sensor.通过基于微机电系统的固态纳米孔传感器检测DNA反离子电流和饱和度。
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引用本文的文献

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Cataloguing the proteome: Current developments in single-molecule protein sequencing.蛋白质组编目:单分子蛋白质测序的当前进展
Biophys Rev (Melville). 2022 Feb 8;3(1):011304. doi: 10.1063/5.0065509. eCollection 2022 Mar.
2
FIB-milled plasmonic nanoapertures allow for long trapping times of individual proteins.聚焦离子束铣削的等离子体纳米孔径可实现单个蛋白质的长时间捕获。
iScience. 2021 Oct 8;24(11):103237. doi: 10.1016/j.isci.2021.103237. eCollection 2021 Nov 19.
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Recent Advances in Electrochemical and Optical Sensors for Detecting Tryptophan and Melatonin.
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Nanopore Technology for the Application of Protein Detection.用于蛋白质检测的纳米孔技术。
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Nanopore sensing: A physical-chemical approach.纳孔传感:物理化学方法。
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Actinoporins: From the Structure and Function to the Generation of Biotechnological and Therapeutic Tools.肌动蛋白原:从结构和功能到生物技术和治疗工具的产生。
Biomolecules. 2020 Apr 2;10(4):539. doi: 10.3390/biom10040539.
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Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore.利用 aerolysin 纳米孔对二十种蛋白质氨基酸进行电学识别。
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Interactions of a Polypeptide with a Protein Nanopore Under Crowding Conditions.在拥挤条件下多肽与蛋白质纳米孔的相互作用。
ACS Nano. 2019 Apr 23;13(4):4469-4477. doi: 10.1021/acsnano.9b00008. Epub 2019 Apr 3.
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The Utility of Nanopore Technology for Protein and Peptide Sensing.纳米孔技术在蛋白质和肽传感中的应用。
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Dynamics of a polyelectrolyte through aerolysin channel as a function of applied voltage and concentration.作为施加电压和浓度函数的多电解质通过气单胞菌溶素通道的动力学。
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