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淡水沉积物中植物叶片的质量损失和DNA释放

Plant leaf mass loss and DNA release in freshwater sediments.

作者信息

Poté John, Ackermann Rafaël, Wildi Walter

机构信息

University of Geneva, Institute FA Forel, Versoix, Switzerland.

出版信息

Ecotoxicol Environ Saf. 2009 Jul;72(5):1378-83. doi: 10.1016/j.ecoenv.2009.04.010. Epub 2009 May 5.

Abstract

This work constitutes a part of a wider study examining the degradation and release of plant DNA into the environment. Microcosm studies investigated the kinetics of leaf and DNA content degradation in a specific variety of tomato (Admiro) after incubation in sediments over 30 days at 20, 10, and 4 degrees C. Temperature and microorganisms have been found to play a key role in the decomposition of plant material in freshwater sediment. A two-compartment first-order function fitted well both tomato leaf matter degradation and DNA content mass loss. Genomic analysis indicated that before having been released, an important part of DNA may be degraded inside plant tissues during decomposition in sediments. PCR amplification demonstrated that, after having been released, DNA can both be rapidly adsorbed onto sediment particles and persist as dissolved extracellular DNA in the water column.

摘要

这项工作是一项更广泛研究的一部分,该研究考察了植物DNA在环境中的降解和释放情况。微观世界研究调查了特定品种番茄(Admiro)的叶片和DNA含量在20、10和4摄氏度下于沉积物中孵育30天后的降解动力学。已发现温度和微生物在淡水沉积物中植物物质的分解过程中起关键作用。一个两室一阶函数很好地拟合了番茄叶片物质降解和DNA含量的质量损失。基因组分析表明,在释放之前,DNA的一个重要部分可能在沉积物分解过程中在植物组织内被降解。PCR扩增表明,释放后,DNA既能迅速吸附到沉积物颗粒上,又能作为溶解的细胞外DNA在水柱中持续存在。

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