生物医学研究信息管理系统——SIMBioMS。
A System for Information Management in BioMedical Studies--SIMBioMS.
机构信息
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB101SD, UK.
出版信息
Bioinformatics. 2009 Oct 15;25(20):2768-9. doi: 10.1093/bioinformatics/btp420. Epub 2009 Jul 24.
UNLABELLED
SIMBioMS is a web-based open source software system for managing data and information in biomedical studies. It provides a solution for the collection, storage, management and retrieval of information about research subjects and biomedical samples, as well as experimental data obtained using a range of high-throughput technologies, including gene expression, genotyping, proteomics and metabonomics. The system can easily be customized and has proven to be successful in several large-scale multi-site collaborative projects. It is compatible with emerging functional genomics data standards and provides data import and export in accepted standard formats. Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented.
AVAILABILITY
The source code, documentation and initialization scripts are available at http://simbioms.org.
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SIMBioMS 是一个基于网络的开源软件系统，用于管理生物医学研究中的数据和信息。它提供了一种解决方案，用于收集、存储、管理和检索有关研究对象和生物医学样本的信息，以及使用各种高通量技术（包括基因表达、基因分型、蛋白质组学和代谢组学）获得的实验数据。该系统可以轻松定制，并已在多个大型多站点协作项目中证明是成功的。它与新兴的功能基因组学数据标准兼容，并提供以可接受的标准格式导入和导出数据。已实施将数据传输到欧洲生物信息学研究所持久档案的协议。
可利用性
源代码、文档和初始化脚本可在 http://simbioms.org 获得。
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