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海河口菌属一新种,从日本海的沙质沉积物中分离得到。

Aestuariibacter litoralis sp. nov., isolated from a sandy sediment of the Sea of Japan.

机构信息

NODAI Culture Collection Center, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan.

Pacific Institute of Bioorganic Chemistry, Far-Eastern Branch, Russian Academy of Sciences, 690022 Vladivostok, Prospect 100 Let Vladivostoku 159, Russia.

出版信息

Int J Syst Evol Microbiol. 2010 Feb;60(Pt 2):317-320. doi: 10.1099/ijs.0.012435-0. Epub 2009 Aug 3.

Abstract

The phenotypic and phylogenetic characteristics of an aerobic, Gram-negative, motile, non-pigmented Alteromonas-like bacterium (designated strain KMM 3894(T)), isolated from a sandy sediment sample collected offshore of the Sea of Japan, were investigated. Comparative 16S rRNA gene sequence analysis revealed that strain KMM 3894(T) belonged to the genus Aestuariibacter and was most closely related to Aestuariibacter halophilus JC2043(T) (95.5 % sequence similarity). Fatty acid analysis showed C(16 : 1)omega7c, C(18 : 1)omega7c, and C(16 : 0) as the dominant components. Strain KMM 3894(T) could be differentiated from recognized species of the genus Aestuariibacter by its ability to grow at 4 degrees C and at 30 degrees C, the optimum temperature for growth, and its inability to utilize most carbohydrates. On the basis of the phenotypic, chemotaxonomic and phylogenetic data, strain KMM 3894(T) is considered to represent a novel species of the genus Aestuariibacter, for which the name Aestuariibacter litoralis sp. nov. is proposed. The type strain is KMM 3894(T) (=NRIC 0754(T)=JCM 15896(T)).

摘要

从日本海近海的沙质沉积物样本中分离到一株好氧、革兰氏阴性、运动、非色素的交替单胞菌样细菌(命名为 KMM 3894(T) 株),对其表型和系统发育特征进行了研究。比较 16S rRNA 基因序列分析表明,KMM 3894(T) 株属于港湾杆菌属,与盐生港湾杆菌 JC2043(T)(同源性为 95.5%)最为密切相关。脂肪酸分析表明,菌株 KMM 3894(T) 的主要成分为 C(16:1)ω7c、C(18:1)ω7c 和 C(16:0)。与已鉴定的港湾杆菌属的种相比,KMM 3894(T) 株能够在 4°C 和 30°C 下生长,最适生长温度为 30°C,且不能利用大多数碳水化合物,这是它与其他种的区别。基于表型、化学分类和系统发育数据,KMM 3894(T) 株被认为代表了港湾杆菌属的一个新种,将其命名为海洋港湾杆菌(Aestuariibacter litoralis)sp. nov.。模式菌株为 KMM 3894(T)(=NRIC 0754(T)=JCM 15896(T))。

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