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软珊瑚杆菌属(Fluctibacter),新属,新种,从夏威夷瓦胡岛卡内奥赫湾的珊瑚鹿角杯(Montipora capitata)上的珊瑚中分离得到,将嗜盐海杆菌(Aestuariibacter halophilus)重新分类为软珊瑚杆菌(Fluctibacter halophilus)组合新名,以及海洋产冰菌(Paraglaciecola oceanifecundans)作为冰石枝菌(Paraglaciecola agarilytica)的晚生异名。

Fluctibacter corallii gen. nov., sp. nov., isolated from the coral Montipora capitata on a reef in Kāne'ohe Bay, O'ahu, Hawai'i, reclassification of Aestuariibacter halophilus as Fluctibacter halophilus comb. nov., and Paraglaciecola oceanifecundans as a later heterotypic synonym of Paraglaciecola agarilytica.

机构信息

Department of Biology, Southern Oregon University, Ashland, OR, USA.

Microbiology Graduate Program, University of Delaware, Newark, DE, USA.

出版信息

Antonie Van Leeuwenhoek. 2024 Mar 1;117(1):45. doi: 10.1007/s10482-024-01934-4.

Abstract

Strain AA17 was isolated from an apparently healthy fragment of Montipora capitata coral from the reef surrounding Moku o Lo'e in Kāne'ohe Bay, O'ahu, Hawai'i, USA, and was taxonomically evaluated using a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain AA17 shared the greatest similarity with Aestuariibacter halophilus JC2043 (96.6%), and phylogenies based on 16S rRNA gene sequences grouped strain AA17 with members of the Aliiglaciecola, Aestuariibacter, Lacimicrobium, Marisediminitalea, Planctobacterium, and Saliniradius genera. To more precisely infer the taxonomy of strain AA17, a phylogenomic analysis was conducted and indicated that strain AA17 formed a monophyletic clade with A. halophilus JC2043, divergent from Aestuariibacter salexigens JC2042 and other related genera. As a result of monophyly and multiple genomic metrics of genus demarcation, strain AA17 and A. halophilus JC2043 comprise a distinct genus for which the name Fluctibacter gen. nov. is proposed. Based on a polyphasic characterisation and identifying differences in genomic and taxonomic data, strain AA17 represents a novel species, for which the name Fluctibacter corallii sp. nov. is proposed. The type strain is AA17 (= LMG 32603 = NCTC 14664). This work also supports the reclassification of A. halophilus as Fluctibacter halophilus comb. nov., which is the type species of the Fluctibacter genus. Genomic analyses also support the reclassification of Paraglaciecola oceanifecundans as a later heterotypic synonym of Paraglaciecola agarilytica.

摘要

菌株 AA17 是从美国夏威夷瓦胡岛卡内奥赫湾莫库洛埃环礁周围的健康块状 Montipora capitata 珊瑚中分离出来的,采用多相分类法进行了分类学评估。部分 16S rRNA 基因序列的比较表明,菌株 AA17 与 Aestuariibacter halophilus JC2043 的相似度最高(96.6%),基于 16S rRNA 基因序列构建的系统发育树将菌株 AA17 与 Aliiglaciecola、Aestuariibacter、Lacimicrobium、Marisediminitalea、Planctobacterium 和 Saliniradius 属的成员聚在一起。为了更准确地推断菌株 AA17 的分类地位,进行了系统基因组分析,结果表明菌株 AA17 与 A. halophilus JC2043 形成一个单系分支,与 Aestuariibacter salexigens JC2042 和其他相关属不同。由于单系性和属划分的多个基因组指标,菌株 AA17 和 A. halophilus JC2043 构成了一个独特的属,因此提出了 Fluctibacter 属的新名称。基于多相特征以及基因组和分类数据的差异,菌株 AA17 代表了一个新的物种,因此提出了 Fluctibacter corallii sp. nov. 的新名称。模式菌株为 AA17(=LMG 32603=NCTC 14664)。这项工作还支持将 A. halophilus 重新分类为 Fluctibacter halophilus comb. nov.,这是 Fluctibacter 属的模式种。基因组分析也支持将 Paraglaciecola oceanifecundans 重新分类为 Paraglaciecola agarilytica 的异名。

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