Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, PR China.
Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1289-1295. doi: 10.1099/ijs.0.012930-0. Epub 2009 Aug 10.
An aerobic, Gram-staining-negative, rod or ovoid-shaped bacterial isolate, strain NH52J(T), was isolated from a sandy sediment sample from the South China Sea. Strain NH52J(T) exhibited tumbling motility, formed beige or faint pink colonies, gave a positive reaction in tests for catalase and oxidase and required NaCl for growth. Optimal growth was observed at pH 7.8-9.3, at 30 degrees C and in the presence of 2.0-4.0 % (w/v) NaCl. The novel strain did not synthesize bacteriochlorophyll a, and the DNA G+C content was 62 %. The major fatty acids were C(18 : 1)omega7c, C(16 : 0) and C(18 : 1)omega7c 11-methyl. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NH52J(T) was affiliated to the genus Roseovarius of the class Alphaproteobacteria. Roseovarius pacificus and Roseovarius aestuarii were the most closely related recognized species to strain NH52J(T) with 16S rRNA gene sequence similarity values of 95.0 and 95.7 %, respectively. Sequence similarity values between strain NH52J(T) and other phylogenetically related species were all below 95.0 %. Based on the phenotypic, chemotaxonomic and phylogenetic data presented, strain NH52J(T) is considered to represent a novel species of the genus Roseovarius, for which the name Roseovarius nanhaiticus sp. nov. is proposed. The type strain is NH52J(T) (=LMG 24840(T)=CCTCC AB 208317(T)=MCCC 1A03543(T)).
一株好氧、革兰氏阴性、杆状或卵圆形的细菌分离株,菌株 NH52J(T),是从南海的沙质沉积物样本中分离出来的。菌株 NH52J(T)表现出翻滚运动,形成米色或淡粉色菌落,过氧化氢酶和氧化酶试验呈阳性,生长需要 NaCl。最佳生长条件为 pH7.8-9.3、30°C 和 2.0-4.0%(w/v)NaCl。该新菌株不合成细菌叶绿素 a,DNA G+C 含量为 62%。主要脂肪酸为 C(18:1)omega7c、C(16:0)和 C(18:1)omega7c 11-甲基。基于 16S rRNA 基因序列的系统发育分析表明,菌株 NH52J(T)属于 Alpha 变形菌纲的玫瑰杆菌属。与菌株 NH52J(T)最接近的是太平洋玫瑰杆菌和港湾玫瑰杆菌,其 16S rRNA 基因序列相似性值分别为 95.0%和 95.7%。与其他系统发育上相关的菌株之间的序列相似性值均低于 95.0%。基于表型、化学分类和系统发育数据,菌株 NH52J(T)被认为代表了玫瑰杆菌属的一个新种,因此提议将其命名为南海玫瑰杆菌新种。模式菌株为 NH52J(T)=LMG 24840(T)=CCTCC AB 208317(T)=MCCC 1A03543(T)。