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本文引用的文献

1
Deterministic walks with inverse-square power-law scaling are an emergent property of predators that use chemotaxis to locate randomly distributed prey.具有平方反比幂律缩放的确定性游走是捕食者利用趋化作用定位随机分布猎物时出现的一种特性。
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Protein exchange dynamics at chemoreceptor clusters in Escherichia coli.大肠杆菌中化学感受器簇处的蛋白质交换动力学
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Relationship between cellular response and behavioral variability in bacterial chemotaxis.细菌趋化作用中细胞反应与行为变异性之间的关系。
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Chemotaxis in Escherichia coli: a molecular model for robust precise adaptation.大肠杆菌中的趋化作用:一种实现稳健精确适应的分子模型。
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Minimizing errors in identifying Lévy flight behaviour of organisms.尽量减少识别生物体 Lévy 飞行行为时的误差。
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大肠杆菌的超扩散与趋化性——搜索策略、精度和运动性

E. coli superdiffusion and chemotaxis-search strategy, precision, and motility.

作者信息

Matthäus F, Jagodic M, Dobnikar J

机构信息

Center for Modeling and Simulation in the Biosciences (BIOMS), University of Heidelberg, Heidelberg, Germany.

出版信息

Biophys J. 2009 Aug 19;97(4):946-57. doi: 10.1016/j.bpj.2009.04.065.

DOI:10.1016/j.bpj.2009.04.065
PMID:19686641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2726325/
Abstract

Escherichia coli motion is characterized by a sequence of consecutive tumble-and-swim events. In the absence of chemical gradients, the length of individual swims is commonly believed to be distributed exponentially. However, recently there has been experimental indication that the swim-length distribution has the form of a power-law, suggesting that bacteria might perform superdiffusive Lévy-walk motion. In E. coli, the power-law behavior can be induced through stochastic fluctuations in the level of CheR, one of the key enzymes in the chemotaxis signal transmission pathway. We use a mathematical model of the chemotaxis signaling pathway to study the influence of these fluctuations on the E. coli behavior in the absence and presence of chemical gradients. We find that the population with fluctuating CheR performs Lévy-walks in the absence of chemoattractants, and therefore might have an advantage in environments where nutrients are sparse. The more efficient search strategy in sparse environments is accompanied by a generally larger motility, also in the presence of chemoattractants. The tradeoff of this strategy is a reduced precision in sensing and following gradients, as well as a slower adaptation to absolute chemoattractant levels.

摘要

大肠杆菌的运动以一系列连续的翻滚和游动事件为特征。在没有化学梯度的情况下,通常认为单个游动的长度呈指数分布。然而,最近有实验表明游动长度分布呈幂律形式,这表明细菌可能进行超扩散的 Lévy 行走运动。在大肠杆菌中,幂律行为可通过趋化信号传导途径中的关键酶之一 CheR 水平的随机波动诱导产生。我们使用趋化信号传导途径的数学模型来研究这些波动在有无化学梯度情况下对大肠杆菌行为的影响。我们发现,在没有化学引诱剂的情况下,具有波动 CheR 的群体进行 Lévy 行走,因此在营养物质稀少的环境中可能具有优势。在稀疏环境中更有效的搜索策略通常伴随着更大的运动性,在有化学引诱剂的情况下也是如此。这种策略的权衡是在感知和跟随梯度方面精度降低,以及对绝对化学引诱剂水平的适应较慢。