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径向基函数神经网络在菌根真菌 Physisporinus vitreus 和 Neolentinus lepideus 生长速率建模中的应用。

Radial basis function neural networks for modeling growth rates of the basidiomycetes Physisporinus vitreus and Neolentinus lepideus.

机构信息

Group of Wood Protection and Biotechnology, Wood Laboratory, EMPA, Swiss Federal Laboratories for Materials Testing and Research, Lerchenfeldstrasse 5, St. Gallen, Switzerland.

出版信息

Appl Microbiol Biotechnol. 2010 Jan;85(3):703-12. doi: 10.1007/s00253-009-2185-3. Epub 2009 Aug 21.

Abstract

A radial basis function (RBF) neural network was developed and compared against a quadratic response surface (RS) model for predicting the specific growth rates of the biotechnologically important basidiomycetous fungi, Physisporinus vitreus and Neolentinus lepideus, under three environmental conditions: temperature (10-30 degrees C), water activity (0.950-9.998), and pH (4-6). Both the RBF network and polynomial RS model were mathematically evaluated against experimental data using graphical plots and several statistical indices. The evaluation showed that both models gave reasonably good predictions, but the performance of the RBF neural network was superior to that of the classical statistical method for all three data sets used (training, testing, full). Sensitivity analysis revealed that of the three experimental factors the most influential on the growth rate of P. vitreus was water activity, followed by temperature and pH to a lesser extent. In contrast, temperature in particular and then water activity were the key determinants of the development of N. lepideus. RBF neural networks could be a powerful technique for modeling fungal growth behavior under certain parameters and an alternative to time-consuming, traditional microbiological techniques.

摘要

径向基函数 (RBF) 神经网络被开发出来,并与二次响应面 (RS) 模型进行了比较,用于预测生物技术上重要的担子菌真菌 Physisporinus vitreus 和 Neolentinus lepideus 在三种环境条件下的比生长速率:温度(10-30°C)、水分活度(0.950-9.998)和 pH 值(4-6)。RBF 网络和多项式 RS 模型都通过图形和几个统计指标对实验数据进行了数学评估。评估表明,两个模型都给出了合理的预测,但对于使用的所有三个数据集(训练、测试、完整),RBF 神经网络的性能都优于经典统计方法。敏感性分析表明,在三个实验因素中,对 P. vitreus 生长速率影响最大的是水分活度,其次是温度,影响较小,而 pH 值则影响最小。相比之下,温度特别是水分活度是 N. lepideus 发育的关键决定因素。RBF 神经网络可能是在某些参数下对真菌生长行为进行建模的有力技术,并且是耗时的传统微生物技术的替代方法。

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