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艾玛 -- 供国际科学界使用的小鼠突变资源。

EMMA--mouse mutant resources for the international scientific community.

机构信息

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

出版信息

Nucleic Acids Res. 2010 Jan;38(Database issue):D570-6. doi: 10.1093/nar/gkp799. Epub 2009 Sep 26.

Abstract

The laboratory mouse is the premier animal model for studying human disease and thousands of mutants have been identified or produced, most recently through gene-specific mutagenesis approaches. High throughput strategies by the International Knockout Mouse Consortium (IKMC) are producing mutants for all protein coding genes. Generating a knock-out line involves huge monetary and time costs so capture of both the data describing each mutant alongside archiving of the line for distribution to future researchers is critical. The European Mouse Mutant Archive (EMMA) is a leading international network infrastructure for archiving and worldwide provision of mouse mutant strains. It operates in collaboration with the other members of the Federation of International Mouse Resources (FIMRe), EMMA being the European component. Additionally EMMA is one of four repositories involved in the IKMC, and therefore the current figure of 1700 archived lines will rise markedly. The EMMA database gathers and curates extensive data on each line and presents it through a user-friendly website. A BioMart interface allows advanced searching including integrated querying with other resources e.g. Ensembl. Other resources are able to display EMMA data by accessing our Distributed Annotation System server. EMMA database access is publicly available at http://www.emmanet.org.

摘要

实验室小鼠是研究人类疾病的主要动物模型,已经鉴定或生产了数千种突变体,最近则通过基因特异性诱变方法。国际敲除小鼠联盟 (IKMC) 的高通量策略正在为所有编码蛋白的基因产生突变体。产生敲除系需要巨大的金钱和时间成本,因此,捕获每个突变体的描述数据以及将该系存档以便分发给未来的研究人员是至关重要的。欧洲小鼠突变体档案库 (EMMA) 是一个用于存档和在全球范围内提供小鼠突变株的领先的国际网络基础设施。它与国际小鼠资源协会 (FIMRe) 的其他成员合作,EMMA 是欧洲部分。此外,EMMA 是 IKMC 涉及的四个存储库之一,因此,目前存档的 1700 条线的数量将显著增加。EMMA 数据库收集和整理了每条线的大量数据,并通过用户友好的网站呈现出来。一个 BioMart 接口允许进行高级搜索,包括与其他资源(如 Ensembl)的集成查询。其他资源可以通过访问我们的分布式注释系统服务器来显示 EMMA 数据。EMMA 数据库可在 http://www.emmanet.org 公开获取。

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