Marliere Philippe
Isthmus SARL, 75 rue de la Mare, 75020, Paris, France,
Syst Synth Biol. 2009 Dec;3(1-4):77-84. doi: 10.1007/s11693-009-9040-9. Epub 2009 Oct 10.
Biotechnology has empirically established that it is easier to construct and evaluate variant genes and proteins than to account for the emergence and function of wild-type macromolecules. Systematizing this constructive approach, synthetic biology now promises to infer and assemble entirely novel genomes, cells and ecosystems. It is argued here that the theoretical and computational tools needed for this endeavor are missing altogether. However, such tools may not be required for diversifying organisms at the basic level of their chemical constitution by adding, substituting or removing elements and molecular components through directed evolution under selection. Most importantly, chemical diversification of life forms could be designed to block metabolic cross-feed and genetic cross-talk between synthetic and wild species and hence protect natural habitats and human health through novel types of containment.
生物技术已通过实证证明,构建和评估变异基因及蛋白质比解释野生型大分子的出现和功能更容易。合成生物学将这种建设性方法系统化,现在有望推断和组装全新的基因组、细胞和生态系统。本文认为,这项工作所需的理论和计算工具完全缺失。然而,通过在选择下进行定向进化来添加、替代或去除元素及分子成分,在生物体化学组成的基本层面实现生物多样化,可能并不需要此类工具。最重要的是,生命形式的化学多样化可设计用于阻断合成物种与野生物种之间的代谢交叉供应和遗传串扰,从而通过新型隔离措施保护自然栖息地和人类健康。