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超越定向进化:达尔文选择作为合成生物学的一种工具

Beyond directed evolution: Darwinian selection as a tool for synthetic biology.

作者信息

Porcar Manuel

机构信息

Fundació General de la Universitat de València, Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de València, Postal Code 22085, 46071 València, Spain.

出版信息

Syst Synth Biol. 2010 Mar;4(1):1-6. doi: 10.1007/s11693-009-9045-4. Epub 2009 Oct 10.

Abstract

Synthetic biology is an engineering approach that seeks to design and construct new biological parts, devices and systems, as well as to re-design existing components. However, rationally designed synthetic circuits may not work as expected due to the context-dependence of biological parts. Darwinian selection, the main mechanism through which evolution works, is a major force in creating biodiversity and may be a powerful tool for synthetic biology. This article reviews selection-based techniques and proposes strict Darwinian selection as an alternative approach for the identification and characterization of parts. Additionally, a strategy for fine-tuning of relatively complex circuits by coupling them to a master standard circuit is discussed.

摘要

合成生物学是一种工程学方法,旨在设计和构建新的生物部件、装置和系统,以及重新设计现有组件。然而,由于生物部件的上下文依赖性,合理设计的合成电路可能无法按预期运行。达尔文选择是进化的主要作用机制,是创造生物多样性的主要力量,可能成为合成生物学的有力工具。本文综述了基于选择的技术,并提出将严格的达尔文选择作为识别和表征部件的替代方法。此外,还讨论了通过将相对复杂的电路与主标准电路耦合来对其进行微调的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/361d/2816224/201011efc445/11693_2009_9045_Fig1_HTML.jpg

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