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细胞色素 P450 酶中五配位血红素配合物的电子性质:寻找 Fe(I)氧化态。

Electronic properties of pentacoordinated heme complexes in cytochrome P450 enzymes: search for an Fe(I) oxidation state.

机构信息

The Manchester Interdisciplinary Biocenter and the School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, United Kingdom.

出版信息

Phys Chem Chem Phys. 2009 Nov 21;11(43):10219-26. doi: 10.1039/b911966c. Epub 2009 Sep 22.

Abstract

The cytochrome P450s are versatile enzymes that catalyze a range of monoxygenation reactions. Their catalytic cycle includes molecular oxygen binding and two reduction and protonation steps to create the active species, Compound I. In an anaerobic environment, however, only two reduction steps starting from the resting state can take place. Currently, very little information is known on this doubly-reduced species; therefore, we have performed a detailed density functional theory (DFT) and combined quantum mechanics/molecular mechanics (QM/MM) study on this complex. In principle, the doubly-reduced pentacoordinated heme can exist in two possible electronic configurations, namely an Fe(I) with closed-shell heme or an Fe(II) coupled to a heme anion radical [Fe(II) Por(-)]. Our calculations show that there are several close-lying spin states with a [Fe(II) Por(-)] configuration and these states are much lower in energy than the alternative [Fe(I) Por(0)] situation. We have calculated spectroscopic parameters of the lowest lying sextet spin state, including IR spectra and EPR parameters.

摘要

细胞色素 P450 是多功能酶,能催化一系列单加氧反应。它们的催化循环包括分子氧结合以及两个还原和质子化步骤,以产生活性物质复合物 I。然而,在无氧环境中,只能从静止状态开始进行两个还原步骤。目前,对于这种双还原物种知之甚少;因此,我们对该配合物进行了详细的密度泛函理论(DFT)和量子力学/分子力学(QM/MM)联合研究。原则上,双还原的五配位血红素可以存在于两种可能的电子构型中,即具有封闭壳层血红素的 Fe(I)或与血红素阴离子自由基 [Fe(II)Por(-)] 偶联的 Fe(II)。我们的计算表明,存在几种具有 [Fe(II)Por(-)] 构型的近邻自旋态,这些态的能量远低于替代的 [Fe(I)Por(0)] 情况。我们已经计算了最低六重态自旋态的光谱参数,包括 IR 光谱和 EPR 参数。

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