Suppr超能文献

在活性介质中生物聚合物动力学中的屈曲、硬化和负耗散。

Buckling, stiffening, and negative dissipation in the dynamics of a biopolymer in an active medium.

机构信息

Department of Physics, Centre for Condensed Matter Theory, Indian Institute of Science, Bangalore 560 012, India.

出版信息

Proc Natl Acad Sci U S A. 2009 Nov 24;106(47):19776-9. doi: 10.1073/pnas.0900451106. Epub 2009 Nov 9.

Abstract

We present a generic theory for the dynamics of a stiff filament under tension, in an active medium with orientational correlations, such as a microtubule in contractile actin. In sharp contrast to the case of a passive medium, we find the filament can stiffen, and possibly oscillate or buckle, depending on both the contractile or tensile nature of the activity and the filament-medium anchoring interaction. We also demonstrate a strong violation of the fluctuation-dissipation (FD) relation in the effective dynamics of the filament, including a negative FD ratio. Our approach is also of relevance to the dynamics of axons, and our model equations bear a remarkable formal similarity to those in recent work [Martin P, Hudspeth AJ, Juelicher F (2001) Proc Natl Acad Sci USA 98:14380-14385] on auditory hair cells. Detailed tests of our predictions can be made by using a single filament in actomyosin extracts or bacterial suspensions.

摘要

我们提出了一个在主动介质中张力下刚性细丝动力学的通用理论,主动介质具有定向相关特性,例如收缩状态下的肌动蛋白微管。与被动介质的情况形成鲜明对比的是,我们发现取决于活性的收缩或拉伸性质以及细丝-介质的锚固相互作用,细丝可以变硬,并且可能会发生振动或弯曲。我们还证明了在细丝的有效动力学中存在强烈的违反波动耗散(FD)关系的情况,包括 FD 比为负。我们的方法也与轴突动力学有关,我们的模型方程与最近关于听觉毛细胞的工作[Martin P, Hudspeth AJ, Juelicher F (2001) Proc Natl Acad Sci USA 98:14380-14385]具有显著的形式相似性。通过在肌球蛋白提取物或细菌悬浮液中使用单个细丝,可以对我们的预测进行详细测试。

相似文献

2
Length regulation of active biopolymers by molecular motors.分子马达对活性生物聚合物的长度调控。
Phys Rev Lett. 2012 Jun 22;108(25):258103. doi: 10.1103/PhysRevLett.108.258103.
3
Effective-medium approach for stiff polymer networks with flexible cross-links.用于具有柔性交联的刚性聚合物网络的有效介质方法。
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jun;79(6 Pt 1):061914. doi: 10.1103/PhysRevE.79.061914. Epub 2009 Jun 11.
4
Elasticity of biopolymer filaments.生物聚合物长丝的弹性。
Acta Biomater. 2013 Jul;9(7):7320-5. doi: 10.1016/j.actbio.2013.03.001. Epub 2013 Mar 15.
8
Nonlinear elasticity of stiff biopolymers connected by flexible linkers.由柔性连接体连接的刚性生物聚合物的非线性弹性
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Apr;79(4 Pt 1):041928. doi: 10.1103/PhysRevE.79.041928. Epub 2009 Apr 29.

引用本文的文献

2
Chirality and odd mechanics in active columnar phases.活性柱状相中手性与奇异力学
PNAS Nexus. 2024 Sep 10;3(10):pgae398. doi: 10.1093/pnasnexus/pgae398. eCollection 2024 Oct.
3
An Integrated Cytoskeletal Model of Neurite Outgrowth.神经突生长的综合细胞骨架模型。
Front Cell Neurosci. 2018 Nov 26;12:447. doi: 10.3389/fncel.2018.00447. eCollection 2018.
4
Mechanical systems biology of C. elegans touch sensation.秀丽隐杆线虫触觉感受的机械系统生物学
Bioessays. 2015 Mar;37(3):335-44. doi: 10.1002/bies.201400154. Epub 2015 Jan 19.
5
Dynamics of active semiflexible polymers.活性半柔性聚合物的动力学
Biophys J. 2014 Sep 2;107(5):1065-1073. doi: 10.1016/j.bpj.2014.07.034.
6
Emergent complexity of the cytoskeleton: from single filaments to tissue.细胞骨架的突发复杂性:从单丝到组织
Adv Phys. 2013 Jan;62(1):1-112. doi: 10.1080/00018732.2013.771509. Epub 2013 Mar 6.
8
Active actin gels.活性肌动蛋白凝胶
Commun Integr Biol. 2012 Jan 1;5(1):39-42. doi: 10.4161/cib.18286.

本文引用的文献

3
Nonequilibrium microtubule fluctuations in a model cytoskeleton.模型细胞骨架中的非平衡微管波动
Phys Rev Lett. 2008 Mar 21;100(11):118104. doi: 10.1103/PhysRevLett.100.118104.
4
Fluctuations and rheology in active bacterial suspensions.活性细菌悬浮液中的波动与流变学
Phys Rev Lett. 2007 Oct 5;99(14):148302. doi: 10.1103/PhysRevLett.99.148302. Epub 2007 Oct 3.
5
Mechanical properties of axons.轴突的力学特性。
Phys Rev Lett. 2007 Jul 6;99(1):018301. doi: 10.1103/PhysRevLett.99.018301. Epub 2007 Jul 3.
6
Tension dynamics in semiflexible polymers. I. Coarse-grained equations of motion.半柔性聚合物中的张力动力学。I. 粗粒化运动方程。
Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031905. doi: 10.1103/PhysRevE.75.031905. Epub 2007 Mar 7.
7
Hydrodynamics of isotropic and liquid crystalline active polymer solutions.各向同性和液晶活性聚合物溶液的流体动力学
Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Dec;74(6 Pt 1):061913. doi: 10.1103/PhysRevE.74.061913. Epub 2006 Dec 29.
8
Nonequilibrium mechanics of active cytoskeletal networks.活性细胞骨架网络的非平衡力学
Science. 2007 Jan 19;315(5810):370-3. doi: 10.1126/science.1134404.
9
The cell as a material.作为物质的细胞。
Curr Opin Cell Biol. 2007 Feb;19(1):101-7. doi: 10.1016/j.ceb.2006.12.002. Epub 2006 Dec 15.
10
Propagation and relaxation of tension in stiff polymers.刚性聚合物中张力的传播与松弛
Phys Rev Lett. 2005 Feb 25;94(7):077804. doi: 10.1103/PhysRevLett.94.077804.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验