Piton Jérémie, Matrat Stéphanie, Petrella Stéphanie, Jarlier Vincent, Aubry Alexandra, Mayer Claudine
Département de Biologie Structurale et Chimie, URA du CNRS, Institut Pasteur, France.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Nov 1;65(Pt 11):1182-6. doi: 10.1107/S1744309109042067. Epub 2009 Oct 30.
Mycobacterium tuberculosis DNA gyrase, a nanomachine that is involved in the regulation of DNA topology, is the only type II topoisomerase present in this organism and hence is the sole target for fluoroquinolone action. The breakage-reunion domain of the A subunit plays an essential role in DNA binding during the catalytic cycle. Two constructs of 53 and 57 kDa (termed GA53BK and GA57BK) corresponding to this domain have been overproduced, purified and crystallized. Diffraction data were collected from four crystal forms. The resolution limits ranged from 4.6 to 2.7 angstrom depending on the crystal form. The best diffracting crystals belonged to space group C2, with a biological dimer in the asymmetric unit. This is the first report of the crystallization and preliminary X-ray diffraction analysis of the breakage-reunion domain of DNA gyrase from a species containing one unique type II topoisomerase.
结核分枝杆菌DNA回旋酶是一种参与DNA拓扑结构调控的纳米机器,是该生物体中唯一存在的II型拓扑异构酶,因此是氟喹诺酮类药物作用的唯一靶点。A亚基的断裂-重连结构域在催化循环中DNA结合过程中起关键作用。对应于该结构域的两种53 kDa和57 kDa构建体(称为GA53BK和GA57BK)已过量表达、纯化并结晶。从四种晶体形式收集了衍射数据。根据晶体形式,分辨率极限范围为4.6至2.7埃。衍射效果最佳的晶体属于空间群C2,不对称单元中有一个生物学二聚体。这是关于含有一种独特II型拓扑异构酶的物种的DNA回旋酶断裂-重连结构域的结晶及初步X射线衍射分析的首次报道。