College of Life Science and Technology of Xinjiang University, Urumqi, Xinjiang 830046, PR China.
College of Life Sciences, Wuhan University, Wuhan 430072, PR China.
Int J Syst Evol Microbiol. 2010 Oct;60(Pt 10):2377-2381. doi: 10.1099/ijs.0.018481-0. Epub 2009 Nov 20.
A Gram-staining-negative, yellow-coloured, strictly aerobic, non-spore-forming, rod-shaped bacterium, designated HS39(T), isolated from a soil sample collected from a natural Populus euphratica forest in Xinjiang, China, was characterized using a polyphasic approach. The isolate grew optimally at 30-37 °C, at pH 6.5-8.0 and with 0-3 % NaCl. Analysis of the 16S rRNA gene sequence of strain HS39(T) revealed that it is a member of the genus Sphingobacterium. Sphingobacterium mizutaii ATCC 33299(T) was the nearest relative (94.0 % 16S rRNA gene sequence similarity). The G+C content of the genomic DNA was 40.2 mol%. The major fatty acids were iso-C₁₅:₀, iso-C₁₇:₀ 3-OH and summed feature 3 (comprising C₁₆:₁ω6c and/or C₁₆:₁ω7c). The predominant isoprenoid quinone was MK-7. On the basis of phenotypic properties and phylogenetic inference, strain HS39(T) represents a novel species of the genus Sphingobacterium, for which the name Sphingobacterium shayense sp. nov. is proposed. The type strain is HS39(T) (=CCTCC AB 209006(T) =NRRL B-59203(T)).
一株革兰氏阴性、黄色、严格需氧、不产芽孢的杆状细菌,命名为 HS39(T),从中国新疆自然胡杨林的土壤样本中分离得到,采用多相分类法进行了表征。该分离物在 30-37 °C、pH 6.5-8.0 和 0-3%NaCl 下生长最佳。对菌株 HS39(T)的 16S rRNA 基因序列分析表明,它是鞘氨醇单胞菌属的一个成员。与 Sphingobacterium mizutaii ATCC 33299(T)(94.0%16S rRNA 基因序列相似性)亲缘关系最近。基因组 DNA 的 G+C 含量为 40.2mol%。主要脂肪酸为 iso-C₁₅:₀、iso-C₁₇:₀ 3-OH 和特征性脂肪酸 3(包含 C₁₆:₁ω6c 和/或 C₁₆:₁ω7c)。主要的异戊二烯醌是 MK-7。基于表型特征和系统发育推断,菌株 HS39(T)代表鞘氨醇单胞菌属的一个新种,建议命名为沙氏鞘氨醇单胞菌(Sphingobacterium shayense)sp. nov.。模式菌株为 HS39(T)(=CCTCC AB 209006(T)=NRRL B-59203(T))。