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和田鞘氨醇单胞菌新种,从胡杨林中土壤中分离得到,以及对鞘氨醇单胞菌大田和鞘氨醇单胞菌沙洋的描述进行了修正。

Sphingobacterium hotanense sp. nov., isolated from soil of a Populus euphratica forest, and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium shayense.

机构信息

College of Life Science and Technology of Xinjiang University, Urumchi, Xinjiang 830046, PR China.

College of Life Sciences, Wuhan University, Wuhan 430072, PR China.

出版信息

Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):815-820. doi: 10.1099/ijs.0.030155-0. Epub 2012 May 18.

Abstract

A novel Gram-staining-negative bacterial strain, designated XH4(T), was isolated from soil of a Populus euphratica forest in the Hotan River valley, Xinjiang Uyghur autonomous region, PR China. The cells were strictly aerobic, non-motile, short rods. The isolate grew optimally at 37 °C and at pH 7.0-8.0. Based on 16S rRNA gene sequence analysis, strain XH4(T) belonged to the genus Sphingobacterium and was closely related to Sphingobacterium mizutaii ATCC 33299(T) (96.1 % sequence similarity). The DNA G+C content was 41.2 mol%. The major polar lipid of strain XH4(T) was phosphatidylethanolamine, and several unidentified polar lipids were also present. Strain XH4(T) showed the typical chemotaxonomic features of the genus Sphingobacterium, with the presence of ceramide phosphorylethanolamine 2 (CerPE-2) as the major ceramide. The major cellular fatty acids of strain XH4(T) were iso-C15 : 0 (34.0 %), summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c; 20.7 %) and iso-C17 : 0 3-OH (14.7 %). The predominant isoprenoid quinone was MK-7. On the basis of phenotypic data and phylogenetic inference, strain XH4(T) represents a novel species of the genus Sphingobacterium, for which the name Sphingobacterium hotanense sp. nov. is proposed. The type strain is XH4(T) ( = NRRL B-59204(T)  = CCTCC AB 209007(T)). Emended descriptions of Sphingobacterium daejeonense and Sphingobacterium shayense are also given.

摘要

一株新的革兰氏阴性细菌菌株,命名为 XH4(T),从中国新疆维吾尔自治区和田河河谷胡杨林中的土壤中分离得到。细胞为严格需氧、非运动、短杆状。该分离株在 37°C 和 pH7.0-8.0 下生长最佳。基于 16S rRNA 基因序列分析,菌株 XH4(T)属于鞘氨醇单胞菌属,与鞘氨醇单胞菌 Sphingobacterium mizutaii ATCC 33299(T)(96.1%序列相似性)最为密切相关。DNA G+C 含量为 41.2mol%。菌株 XH4(T)的主要极性脂为磷脂酰乙醇胺,还存在几种未鉴定的极性脂。菌株 XH4(T)表现出典型的鞘氨醇单胞菌属化学分类特征,以神经酰胺磷酸乙醇胺 2 (CerPE-2)为主要神经酰胺。菌株 XH4(T)的主要细胞脂肪酸为异-C15:0(34.0%)、特征性脂肪酸 3(C16:1ω7c 和/或 C16:1ω6c;20.7%)和异-C17:0 3-OH(14.7%)。主要的异戊烯醌为 MK-7。基于表型数据和系统发育推断,菌株 XH4(T)代表鞘氨醇单胞菌属的一个新种,提议命名为 hotanense 鞘氨醇单胞菌 Sphingobacterium hotanense sp. nov.。模式菌株为 XH4(T)(=NRRL B-59204(T)=CCTCC AB 209007(T))。同时还对 Daejeonense 鞘氨醇单胞菌和 Shayense 鞘氨醇单胞菌进行了描述的修订。

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