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丛生芽胞杆菌(Sphingobacterium bambusae)sp. nov.,从竹林土壤中分离得到。

Sphingobacterium bambusae sp. nov., isolated from soil of bamboo plantation.

机构信息

Institute of Bast Fiber Crops, Chinese Academy of Agriculture Sciences, Hunan 410205, PR China.

出版信息

J Microbiol. 2009 Dec;47(6):693-8. doi: 10.1007/s12275-009-0296-2. Epub 2010 Feb 4.

Abstract

A Gram-negative, non-motile, non-spore-forming bacterial strain designated IBFC2009(T) was isolated from soil of a bamboo plantation. The strain could grow at 11 degrees C approximately 39 degrees C, pH 6.0-9.0, and in the presence of 0 approximately 5% NaCl. Based on 16S rRNA gene sequence analysis, Strain IBFC2009(T) belonged to the genus Sphingobacterium and showed the highest sequence similarity of 94.6% (S. composti T5-12(T)) with the type strains within the genus. The major fatty acids were summed feature 3 (iso-C(15:0) 2-OH and/or C(16:1) omega7c, 34.4%), iso-C(15:0) (22.4%), C(16:0) 3-OH (15.2%), and iso-C(17:0) 3-OH (12.8%). The G+C content of the genomic DNA was 41.0 mol%. According to the phenotypic and genotypic characteristics, Strain IBFC2009(T) should represent a novel species of the genus Sphingobacterium, for which the name Sphingobacterium bambusae sp. nov. is proposed. The type strain is IBFC2009(T) (=CCTCC AB 209162(T) =KCTC 22814(T)).

摘要

一株革兰氏阴性、非运动、非孢子形成的细菌菌株被命名为 IBFC2009(T),从一个竹林种植园的土壤中分离出来。该菌株可以在大约 11 摄氏度至 39 摄氏度的温度下生长,在 pH 值为 6.0-9.0 的条件下生长,并在 0-5%NaCl 的存在下生长。基于 16S rRNA 基因序列分析,菌株 IBFC2009(T)属于鞘氨醇单胞菌属,与该属的模式菌株的相似度最高为 94.6%(S. composti T5-12(T))。主要脂肪酸为 sum 特征 3(iso-C(15:0) 2-OH 和/或 C(16:1) omega7c,34.4%)、iso-C(15:0)(22.4%)、C(16:0) 3-OH(15.2%)和 iso-C(17:0) 3-OH(12.8%)。基因组 DNA 的 G+C 含量为 41.0mol%。根据表型和基因型特征,菌株 IBFC2009(T)代表了鞘氨醇单胞菌属的一个新种,建议命名为 Bambusae sp. nov.。其模式菌株为 IBFC2009(T)=CCTCC AB 209162(T)=KCTC 22814(T)。

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