Center for Immunity, Infection, and Evolution, School of Biological Sciences, University of Edinburgh, West Mains Road, Edinburgh EH9 3JT, United Kingdom.
Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):1041-6. doi: 10.1073/pnas.0909047107. Epub 2009 Dec 1.
Spatial heterogeneities and spatial separation of hosts are often seen as key factors when developing accurate predictive models of the spread of pathogens. The question we address in this paper is how coarse the resolution of the spatial data can be for a model to be a useful tool for informing control policies. We examine this problem using the specific case of foot-and-mouth disease spreading between farms using the formulation developed during the 2001 epidemic in the United Kingdom. We show that, if our model is carefully parameterized to match epidemic behavior, then using aggregate county-scale data from the United States is sufficient to closely determine optimal control measures (specifically ring culling). This result also holds when the approach is extended to theoretical distributions of farms where the spatial clustering can be manipulated to extremes. We have therefore shown that, although spatial structure can be critically important in allowing us to predict the emergent population-scale behavior from a knowledge of the individual-level dynamics, for this specific applied question, such structure is mostly subsumed in the parameterization allowing us to make policy predictions in the absence of high-quality spatial information. We believe that this approach will be of considerable benefit across a range of disciplines where data are only available at intermediate spatial scales.
宿主的空间异质性和空间分离通常被认为是开发病原体传播精确预测模型的关键因素。我们在本文中要解决的问题是,对于一个模型来说,空间数据的分辨率可以粗糙到何种程度,才能成为制定控制政策的有用工具。我们使用英国 2001 年口蹄疫疫情期间制定的公式,以农场之间口蹄疫传播为例来研究这个问题。我们表明,如果我们的模型经过精心参数化以匹配疫情行为,那么使用美国的聚合县级数据就足以准确确定最佳控制措施(具体来说是环形扑杀)。当该方法扩展到农场的理论分布时,也可以得到相同的结果,在这些理论分布中,空间聚类可以被操纵到极致。因此,我们已经表明,尽管空间结构对于我们根据个体层面的动态来预测群体层面的涌现行为非常重要,但对于这个具体的应用问题,这种结构在允许我们在没有高质量空间信息的情况下进行政策预测的参数化中大部分被包含在内。我们相信,这种方法将在一系列数据仅在中等空间尺度可用的学科中具有相当大的益处。