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粪拟杆菌新种,从人粪便中分离得到。

Bacteroides faecis sp. nov., isolated from human faeces.

机构信息

University of Science & Technology, Biological Resources Center, KRIBB, Daejeon 305-806, Republic of Korea.

Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul 130-701, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2010 Nov;60(Pt 11):2572-2576. doi: 10.1099/ijs.0.020024-0. Epub 2009 Dec 11.

Abstract

Two anaerobic, Gram-negative, non-motile and non-spore-forming bacterial strains, designated MAJ27(T) and MAJ26, were isolated from human faeces. Both isolates grew optimally at 37 °C, were oxidase- and catalase-negative, were sensitive to bile and produced acid from fermentation of several substrates, including glucose. A study based on 16S rRNA gene sequences showed that both isolates were closely related to type strains of species of the genus Bacteroides. Comparisons of the isolates with Bacteroides thetaiotaomicron VPI 5482(T) and Bacteroides finegoldii JCM 13345(T) showed high levels of 16S rRNA gene sequence similarity (98.6-98.7 and 96.9-97.0 %, respectively), but low levels of DNA-DNA relatedness (≤22 %). The DNA G+C content (42.7±1 mol%) and the major fatty acid (anteiso-C(15 : 0), 39.3-42.5 %) supported the assignment of the isolates to the genus Bacteroides. Based on phenotypic, chemotaxonomic, genotypic and phylogenetic studies, we propose that strains MAJ27(T) and MAJ26 be classified as representing a novel species, Bacteroides faecis sp. nov. The type strain is MAJ27(T) (=KCTC 5823(T)=JCM 16478(T)).

摘要

两株厌氧、革兰氏阴性、非运动和非孢子形成的细菌菌株,命名为 MAJ27(T) 和 MAJ26,从人类粪便中分离得到。这两种分离株在 37°C 下最佳生长,氧化酶和过氧化氢酶均为阴性,对胆汁敏感,并能从多种底物(包括葡萄糖)的发酵中产生酸。基于 16S rRNA 基因序列的研究表明,这两种分离株与拟杆菌属种的模式菌株密切相关。与 Bacteroides thetaiotaomicron VPI 5482(T) 和 Bacteroides finegoldii JCM 13345(T) 的比较表明,16S rRNA 基因序列相似度非常高(分别为 98.6-98.7%和 96.9-97.0%),但 DNA-DNA 同源性水平较低(≤22%)。DNA G+C 含量(42.7±1 mol%)和主要脂肪酸(anteiso-C(15∶0),39.3-42.5%)支持将这些分离株归类为拟杆菌属。基于表型、化学分类、基因型和系统发育研究,我们建议将菌株 MAJ27(T) 和 MAJ26 分类为代表一个新物种,即 Faecisacteroides faecis sp. nov. 。模式株为 MAJ27(T)(=KCTC 5823(T)=JCM 16478(T))。

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