Shin Yeseul, Park Soo-Je, Paek Jayoung, Kim Joong-Su, Rhee Moon-Soo, Kim Hongik, Kook Joong-Ki, Chang Young-Hyo
ABS Research Support Center/Korean Collection for Type Cultures, KRIBB, 125 Gwahak-ro, Yuseong-gu, Daejeon 305-806, Republic of Korea.
Department of Biology and Research Institute for Basic Sciences, Jeju National University, 102 Jejudaehak-ro, Jeju 650-756, Republic of Korea.
Int J Syst Evol Microbiol. 2017 Nov;67(11):4352-4357. doi: 10.1099/ijsem.0.002226. Epub 2017 Sep 25.
Three bacterial isolates from human faeces, YS-aM39, R2F3-3-3 and R2F3-5-1, were characterized as Gram-negative, strictly anaerobic, non-spore-forming, non-motile, and rod-shaped. Isolate YS-aM39 formed a distinct line of descent, showing greatest 16S rRNA gene sequence relatedness with R2F3-3-3 (97.5 %), R2F3-5-1 (97.5 %), Bacteroides ovatus (98.8 %) and Bacteroides xylanisolvens (97.2 %). Isolates R2F3-3-3 and R2F3-5-1 also formed a distinct line of descent, sharing greatest 16S rRNA gene sequence relatedness with B. ovatus (98.2 %) and B. xylanisolvens (97.2 %). The DNA G+C content of YS-aM39 was 44.8 mol%, that of R2F3-3-3 was 42.4 mol% and that of R2F3-5-1 was 42.6 mol%. The respiratory quinone of all three isolates was menaquinone MK-10. Polar lipid analysis identified phosphatidylethanolamine as the major lipid. The predominant fatty acids in all three isolates were anteiso-C15 : 0, iso-C15 : 0, C16 : 0 3-OH and iso-C17 : 0 3-OH. The major end products of glucose fermentation were acetic acid, lactic acid and formic acid. DNA-DNA hybridization data indicated that two isolates, YS-aM39 and R2F3-3-3, represent a species distinct from B. ovatus and B. xylanisolvens. Finally, in this study, the two isolates represented two new species in the genus Bacteroides, for which we propose the names Bacteroides koreensis sp. nov. (type strain, YS-aM39=KCTC 15520=JCM 31393) and Bacteroides kribbi sp. nov. (type strain, R2F3-3-3=KCTC 15460=JCM 31391).
从人类粪便中分离出的三株细菌,YS-aM39、R2F3-3-3和R2F3-5-1,其特征为革兰氏阴性、严格厌氧、不产芽孢、无运动性且呈杆状。菌株YS-aM39形成了一个独特的谱系,与R2F3-3-3(97.5%)、R2F3-5-1(97.5%)、卵形拟杆菌(98.8%)和木聚糖拟杆菌(97.2%)的16S rRNA基因序列相似度最高。菌株R2F3-3-3和R2F3-5-1也形成了一个独特的谱系,与卵形拟杆菌(98.2%)和木聚糖拟杆菌(97.2%)的16S rRNA基因序列相似度最高。YS-aM39的DNA G+C含量为44.8mol%,R2F3-3-3为42.4mol%,R2F3-5-1为42.6mol%。所有三株分离菌的呼吸醌均为甲基萘醌MK-10。极性脂质分析确定磷脂酰乙醇胺为主要脂质。所有三株分离菌中的主要脂肪酸为anteiso-C15 : 0、iso-C15 : 0、C16 : 0 3-OH和iso-C17 : 0 3-OH。葡萄糖发酵的主要终产物为乙酸、乳酸和甲酸。DNA-DNA杂交数据表明,两株分离菌YS-aM39和R2F3-3-3代表一个与卵形拟杆菌和木聚糖拟杆菌不同的物种。最后,在本研究中,这两株分离菌代表拟杆菌属中的两个新物种,我们将其命名为韩国拟杆菌(Bacteroides koreensis sp. nov.)(模式菌株,YS-aM39=KCTC 15520=JCM 31393)和克里布拟杆菌(Bacteroides kribbi sp. nov.)(模式菌株,R2F3-3-3=KCTC 15460=JCM 31391)。