sORF finder：一个识别具有高编码潜力的小开放阅读框的程序包。
sORF finder: a program package to identify small open reading frames with high coding potential.
机构信息
Plant Science Center, RIKEN, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan.
出版信息
Bioinformatics. 2010 Feb 1;26(3):399-400. doi: 10.1093/bioinformatics/btp688. Epub 2009 Dec 14.
SUMMARY
sORF finder is a program package for identifying small open reading frames (sORFs) with high-coding potential. This application allows the identification of coding sORFs according to the nucleotide composition bias among coding sequences and the potential functional constraint at the amino acid level through evaluation of synonymous and non-synonymous substitution rates.
AVAILABILITY
Online tools and source codes are freely available at http://evolver.psc.riken.jp/.
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
摘要
sORF finder 是一个用于识别具有高编码潜力的小开放阅读框（sORF）的程序包。该应用程序允许根据编码序列中的核苷酸组成偏向以及通过评估同义与非同义替换率在氨基酸水平上潜在的功能约束来识别编码 sORF。
可用性
在线工具和源代码可在 http://evolver.psc.riken.jp/ 免费获取。
补充信息
补充数据可在生物信息学在线获得。
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