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从氘同位素效应和模拟研究推断异常汉逊酵母黄素细胞色素b2反应性中涉及的电子转移步骤。

Electron-transfer steps involved in the reactivity of Hansenula anomala flavocytochrome b2 as deduced from deuterium isotope effects and simulation studies.

作者信息

Capeillère-Blandin C

机构信息

Groupe d'Enzymologie Physico Chimique, Centre de Génétique Moléculaire du CNRS, Gif-sur-Yvette, France.

出版信息

Biochem J. 1991 Feb 15;274 ( Pt 1)(Pt 1):207-17. doi: 10.1042/bj2740207.

DOI:10.1042/bj2740207
PMID:2001234
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1149940/
Abstract

The L-lactate-flavocytochrome b2-ferricyanide electron-transfer system from the yeast Hansenula anomala was investigated by rapid-reaction techniques. The kinetics of reduction of oxidized flavocytochrome b2 by L-lactate and L-[2H]lactate were biphasic both for flavin and haem prosthetic groups and at all concentrations tested. The first-order rate constants of the rapid and slow phases depended upon substrate concentrations, a saturation behaviour being exhibited. Substitution of the C alpha-H atom by 2H was found to cause appreciable changes in the rate constants for the initial reduction of flavin and haem (phase I), which were respectively about 3-fold and 2-fold less than with L-lactate. In contrast, no significant isotope effect was noted on the apparent reduction rate constants of the slow phase, phase II. Under steady-state conditions an isotope effect of 2.0 was found on the overall electron transfer from L-lactate to ferricyanide. These transient reduction results were discussed in terms of a kinetic model implying intra- and inter-protomer electron exchanges between flavin and haem b2, all of which have been experimentally described. Computer simulations indicate that the reaction scheme provides a reasonable explanation of the fast-reduction phase, phase I (in absence of acceptor). The pseudo-first-order rate constant for oxidation of reduced haem b2 in flavocytochrome b2 increased with increasing ferricyanide concentration in a hyperbolic fashion. The limiting value at infinite ferricyanide concentration, which was attributed to the intramolecular electron-transfer rate from ferroflavocytochrome b2 to the iron of ferricyanide within a complex, was 920 +/- 50 s-1 at pH 7.0 and 5 degrees C. Stopped-flow and rapid-freezing measurements showed haem b2 and flavin to be 90 and 44% oxidized respectively under steady-state conditions in presence of ferricyanide. Simulation studies were carried out to check the participation of the proposed reduction sequence in the overall catalytic reaction together with the role of reduced haem b2 (Hr) and flavin semiquinone (Fsq) as electron donors to ferricyanide. When the rate of the intramolecular electron-transfer exchange between Fsq and ferricyanide was adjusted to 200 s-1, simulated data accounted for molar activities defined under various conditions of L-lactate, [2H]lactate and ferricyanide concentrations. Simulation studies were extended to data obtained using cytochrome c as acceptor and reaction catalysed by Saccharomyces cerevisiae flavocytochrome b2. The differences in reactivity observed for Hr and Fsq with ferricyanide and cytochrome c were discussed in terms of redox potentials, electrostatic interactions, distances and accessibility of the participating groups.

摘要

采用快速反应技术对异常汉逊酵母的L-乳酸-黄素细胞色素b2-铁氰化物电子传递系统进行了研究。对于黄素和血红素辅基,以及在所有测试浓度下,L-乳酸和L-[2H]乳酸还原氧化型黄素细胞色素b2的动力学均为双相。快速相和慢速相的一级速率常数取决于底物浓度,呈现出饱和行为。发现用2H取代α-碳原子会导致黄素和血红素初始还原(I相)的速率常数发生明显变化,分别比L-乳酸时小约3倍和2倍。相比之下,在慢速相(II相)的表观还原速率常数上未观察到明显的同位素效应。在稳态条件下,发现从L-乳酸到铁氰化物的总电子转移存在2.0的同位素效应。根据一个动力学模型对这些瞬态还原结果进行了讨论,该模型暗示黄素和血红素b2之间存在原聚体内和原聚体间的电子交换,所有这些都已通过实验描述。计算机模拟表明,该反应方案为快速还原相(I相,无受体时)提供了合理的解释。黄素细胞色素b2中还原型血红素b氧化的伪一级速率常数随铁氰化物浓度的增加呈双曲线增加。在无限铁氰化物浓度下的极限值归因于复合物内从亚铁黄素细胞色素b2到铁氰化物铁的分子内电子转移速率,在pH 7.0和5℃时为920±50 s-1。停流和快速冷冻测量表明,在铁氰化物存在的稳态条件下,血红素b2和黄素分别被氧化90%和44%。进行了模拟研究,以检验所提出的还原序列在整体催化反应中的参与情况,以及还原型血红素b2(Hr)和黄素半醌(Fsq)作为铁氰化物电子供体的作用。当Fsq和铁氰化物之间的分子内电子转移交换速率调整为200 s-1时,模拟数据符合在L-乳酸、[2H]乳酸和铁氰化物浓度的各种条件下定义的摩尔活性。模拟研究扩展到了以细胞色素c为受体以及酿酒酵母黄素细胞色素b2催化的反应所获得的数据。从氧化还原电位、静电相互作用、距离和参与基团的可及性等方面讨论了观察到的Hr和Fsq与铁氰化物和细胞色素c反应性的差异。

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本文引用的文献

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KINETIC INVESTIGATIONS OF YEAST L-LACTATE DEHYDROGENASE (CYTOCHROME B2). I. THE DEHYDROGENATION OF L-LACTATE IN THE PRESENCE AND ABSENCE OF FERRICYANIDE AS ELECTRON ACCEPTOR.酵母L-乳酸脱氢酶(细胞色素b2)的动力学研究。I. 以铁氰化物作为电子受体时L-乳酸的脱氢反应及无电子受体时的情况
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Studies on the mechanism of enzyme-catalyzed oxidation-reduction reactions. VI. Kinetic studies with yeast L-lactate dehydrogenase.酶催化氧化还原反应机制的研究。VI. 酵母L-乳酸脱氢酶的动力学研究。
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Sudden freezing as a technique for the study of rapid reactions.骤冷法作为一种研究快速反应的技术。
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A flavin-mononucleotide-binding site in Hansenula anomala nicked flavocytochrome b2, requiring the association of two domains.异常汉逊酵母切口黄素细胞色素b2中的黄素单核苷酸结合位点,需要两个结构域的缔合。
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Flavocytochrome b2 from baker's yeast. Computer-simulation studies of a new scheme for intramolecular electron transfer.来自面包酵母的黄素细胞色素b2。分子内电子转移新方案的计算机模拟研究。
Eur J Biochem. 1980 May;106(1):151-9.
6
Flavocytochrome b2 (Baker's yeast). Deuterium isotope effect studied by rapid-kinetic methods as a probe for the mechanism of electron transfer.黄素细胞色素b2(面包酵母)。通过快速动力学方法研究氘同位素效应作为电子转移机制的探针。
Eur J Biochem. 1980 Mar;104(2):479-88. doi: 10.1111/j.1432-1033.1980.tb04450.x.
7
The reduction of flavocytochrome b2 by carboxylate radicals. A pulse radiolysis study.羧基自由基对黄素细胞色素b2的还原作用。脉冲辐解研究。
Biochim Biophys Acta. 1984 Apr 27;786(1-2):67-78. doi: 10.1016/0167-4838(84)90155-9.
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A temperature-jump study of the electron transfer reactions in Hansenula anomala flavocytochrome b2.异常汉逊酵母黄素细胞色素b2中电子转移反应的温度跃升研究
Eur J Biochem. 1984 Apr 2;140(1):39-45. doi: 10.1111/j.1432-1033.1984.tb08064.x.
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Study of the Hansenula anomala yeast flavocytochrome-b2-cytochrome-c complex 2. Localization of the main association area.异常汉逊酵母黄素细胞色素b2-细胞色素c复合物2的研究。主要结合区域的定位。
Eur J Biochem. 1983 Oct 3;135(3):577-81. doi: 10.1111/j.1432-1033.1983.tb07691.x.
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Transient kinetics of the one-electron transfer reaction between reduced flavocytochrome b2 and oxidized cytochrome c. Evidence for the existence of a protein complex in the reaction.还原型黄素细胞色素b2与氧化型细胞色素c之间单电子转移反应的瞬态动力学。反应中存在蛋白质复合物的证据。
Eur J Biochem. 1982 Nov 15;128(2-3):533-42. doi: 10.1111/j.1432-1033.1982.tb06998.x.