Suppr超能文献

突触的定量神经蛋白质组学

Quantitative neuroproteomics of the synapse.

作者信息

Ramos-Ortolaza Dinah Lee, Bushlin Ittai, Abul-Husn Noura, Annangudi Suresh P, Sweedler Jonathan, Devi Lakshmi A

机构信息

Department of Pharmacology and Systems Therapeutics, Mount Sinai School of Medicine, New York, NY, USA.

出版信息

Methods Mol Biol. 2010;615:227-46. doi: 10.1007/978-1-60761-535-4_18.

Abstract

An emerging way to study neuropsychiatric or neurodegenerative diseases is by performing proteomic analyses of brain tissues. Here, we describe methods used to isolate and identify the proteins associated with a sample of interest, such as the synapse, as well as to compare the levels of proteins in the sample under different conditions. These techniques, involving subcellular fractionation and modern quantitative proteomics using isotopic labels, can be used to understand the organization of neuronal compartments and the regulation of synaptic function under various conditions.

摘要

一种研究神经精神疾病或神经退行性疾病的新方法是对脑组织进行蛋白质组学分析。在这里,我们描述了用于分离和鉴定与感兴趣的样本(如突触)相关的蛋白质的方法,以及比较不同条件下样本中蛋白质水平的方法。这些技术,包括亚细胞分级分离和使用同位素标记的现代定量蛋白质组学,可用于了解神经元区室的组织以及各种条件下突触功能的调节。

相似文献

1
Quantitative neuroproteomics of the synapse.
Methods Mol Biol. 2010;615:227-46. doi: 10.1007/978-1-60761-535-4_18.
3
SILAC Mass Spectrometry Profiling: A Psychiatric Disorder Perspective.
Adv Exp Med Biol. 2017;974:289-298. doi: 10.1007/978-3-319-52479-5_27.
4
Proteomics Analysis of Colorectal Cancer Cells.
Methods Mol Biol. 2018;1765:155-166. doi: 10.1007/978-1-4939-7765-9_9.
5
Synapse proteomics: current status and quantitative applications.
Expert Rev Proteomics. 2008 Apr;5(2):353-60. doi: 10.1586/14789450.5.2.353.
6
Proteomics of synapse.
Anal Bioanal Chem. 2007 Jan;387(1):25-8. doi: 10.1007/s00216-006-0608-x.
7
Using N-Metabolic Labeling for Quantitative Proteomic Analyses.
Methods Mol Biol. 2017;1546:235-243. doi: 10.1007/978-1-4939-6730-8_20.
8
Quantitative proteomics by stable isotope labeling and mass spectrometry.
Methods Mol Biol. 2007;367:209-18. doi: 10.1385/1-59745-275-0:209.
9
Mass spectrometry-based quantitative proteomics.
Expert Rev Proteomics. 2004 Oct;1(3):317-26. doi: 10.1586/14789450.1.3.317.
10
Proteomic Characterization of Exosomes from HIV-1-Infected Cells.
Methods Mol Biol. 2016;1354:311-26. doi: 10.1007/978-1-4939-3046-3_21.

引用本文的文献

1
Electrochemistry at the Synapse.
Annu Rev Anal Chem (Palo Alto Calif). 2019 Jun 12;12(1):297-321. doi: 10.1146/annurev-anchem-061318-115434. Epub 2019 Feb 1.
2
Hypothalamic CNTF volume transmission shapes cortical noradrenergic excitability upon acute stress.
EMBO J. 2018 Nov 2;37(21). doi: 10.15252/embj.2018100087. Epub 2018 Sep 12.
3
The Proteome of the Murine Presynaptic Active Zone.
Proteomes. 2014 Apr 24;2(2):243-257. doi: 10.3390/proteomes2020243.
4
Morphine administration during low ovarian hormone stage results in transient over expression of fear memories in females.
Front Behav Neurosci. 2015 May 22;9:129. doi: 10.3389/fnbeh.2015.00129. eCollection 2015.
6
An integrated quantitative proteomics and systems biology approach to explore synaptic protein profile changes during morphine exposure.
Neuropsychopharmacology. 2014 Jan;39(1):88-103. doi: 10.1038/npp.2013.227. Epub 2013 Sep 18.
8
Molecular organization of Drosophila neuroendocrine cells by Dimmed.
Curr Biol. 2011 Sep 27;21(18):1515-24. doi: 10.1016/j.cub.2011.08.015. Epub 2011 Sep 1.
9
Investigating endogenous peptides and peptidases using peptidomics.
Biochemistry. 2011 Sep 6;50(35):7447-61. doi: 10.1021/bi200417k. Epub 2011 Aug 15.

本文引用的文献

1
Microproteomics: analysis of protein diversity in small samples.
Mass Spectrom Rev. 2008 Jul-Aug;27(4):316-30. doi: 10.1002/mas.20161.
2
ANIBAL, stable isotope-based quantitative proteomics by aniline and benzoic acid labeling of amino and carboxylic groups.
Mol Cell Proteomics. 2008 Apr;7(4):800-12. doi: 10.1074/mcp.M700216-MCP200. Epub 2007 Dec 13.
4
Neuroproteomics of the synapse and drug addiction.
J Pharmacol Exp Ther. 2006 Aug;318(2):461-8. doi: 10.1124/jpet.105.091520. Epub 2006 Apr 27.
5
Mass spectrometry-based proteomics turns quantitative.
Nat Chem Biol. 2005 Oct;1(5):252-62. doi: 10.1038/nchembio736.
6
Proteomic comparison of two fractions derived from the transsynaptic scaffold.
J Neurosci Res. 2005 Sep 15;81(6):762-75. doi: 10.1002/jnr.20614.
7
Proteomic analysis of synaptosomes using isotope-coded affinity tags and mass spectrometry.
Proteomics. 2005 Jul;5(10):2531-41. doi: 10.1002/pmic.200401198.
8
Quantitative neuropeptidomics of microwave-irradiated mouse brain and pituitary.
Mol Cell Proteomics. 2005 Sep;4(9):1391-405. doi: 10.1074/mcp.T500010-MCP200. Epub 2005 Jun 21.
9
Neuroproteomics: expression profiling of the brain's proteomes in health and disease.
Neurochem Res. 2004 Jun;29(6):1317-31. doi: 10.1023/b:nere.0000023618.35579.7c.
10
Mass spectrometry-based proteomics.
Nature. 2003 Mar 13;422(6928):198-207. doi: 10.1038/nature01511.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验