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从具有重金属耐受性和抗生素产生能力的帕尔克湾沉积物中分离异养细菌。

Isolation of heterotrophic bacteria from Palk Bay sediments showing heavy metal tolerance and antibiotic production.

机构信息

Department of Biotechnology, Alagappa University, Algappapuram, Karaikudi 630003, Tamil Nadu, India.

出版信息

Microbiol Res. 2010 Sep 20;165(7):578-93. doi: 10.1016/j.micres.2009.10.004. Epub 2009 Dec 16.

Abstract

Analysis of culturable and unculturable bacteria and their potential bioactive compounds from Palk Bay is yet to be explored. The present study for the first time characterizes the culturable bacteria from Palk Bay sediment using 16S rRNA gene sequencing. The characterized bacteria were also screened for antibacterial activity against human and aquaculture pathogens. In the 16S rRNA gene sequence analysis characterized that most of the bacteria were affiliated to members of Firmicutes and less with Gammaproteobacteria, Actinobacteria and Alphaproteobacteria. A high portion of (39%) of the bacteria showed antibacterial activity against both Gram positive and Gram negative test strains. The antibiotics from the strain S6-05 were partially purified using solvent extraction followed by TLC and silica column and further characterized by IR analysis. Two active principles A and B showed difference in the activity against Gram positive and Gram negative pathogens. But in the synergistic application they showed excellent activity against all the test pathogens. This study provides the first evidence on the existence of certain Bacillus species in the marine environment, namely Bacillus arsenicus, Bacillus indicus, Bacillus boroniphilus, Bacillus cibi and Bacillus niabensis which also had antibacterial activity. Several of the isolates exhibited tolerance to arsenic and boron to a new level of 25 and 100 mM, respectively. The current study reveals the fact that a great deal remains in the bacterial diversity of Palk Bay region.

摘要

目前尚未对帕尔喀湾可培养和不可培养细菌及其潜在生物活性化合物进行分析。本研究首次使用 16S rRNA 基因测序对帕尔喀湾沉积物中的可培养细菌进行了表征。还对这些细菌进行了抗人类和水产养殖病原体的抗菌活性筛选。在 16S rRNA 基因序列分析中,大多数细菌属于厚壁菌门,而较少属于γ变形菌门、放线菌门和α变形菌门。有 39%的细菌对革兰氏阳性和革兰氏阴性测试菌株均表现出抗菌活性。使用溶剂萃取、TLC 和硅胶柱进一步分离后,从菌株 S6-05 中部分纯化了抗生素,并通过 IR 分析进行了进一步表征。两个活性物质 A 和 B 在对革兰氏阳性和革兰氏阴性病原体的活性方面存在差异。但在协同应用中,它们对所有测试病原体均表现出优异的活性。本研究首次提供了海洋环境中某些芽孢杆菌存在的证据,即砷矿芽孢杆菌、印度芽孢杆菌、硼酸芽孢杆菌、栖稻芽孢杆菌和尼亚布芽孢杆菌,它们也具有抗菌活性。有几个分离株对砷和硼的耐受程度分别达到了 25 和 100mM 的新水平。本研究揭示了一个事实,即帕尔喀湾地区的细菌多样性还有待进一步研究。

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