Suppr超能文献

基于第一性原理分子动力学方法的邻羟基席夫碱型化合物的分子性质研究。

Molecular property investigations of an ortho-hydroxy Schiff base type compound with the first-principle molecular dynamics approach.

机构信息

University of Wrocław, Faculty of Chemistry, 14 F. Joliot-Curie, 50-383 Wrocław, Poland.

出版信息

J Phys Chem B. 2010 Jan 14;114(1):242-53. doi: 10.1021/jp903501m.

Abstract

The structure, proton transfer, and vibrational dynamics under ambient conditions of a selected ortho-hydroxy Schiff base type compound, 2-(N-methyl-alpha-iminoethyl)-4-chlorophenol, containing a very short intramolecular hydrogen bond, were investigated computationally in the gas phase and in the crystal by density functional theory (DFT) based first-principle molecular dynamics (FPMD). It is found that the proton is well localized on the nitrogen side of the O...H...N bridge in the crystal phase, in agreement with X-ray diffraction experiments, while a more labile proton is located most of the time on the oxygen side in a vacuum. Environmental effects on this very strong hydrogen bond thus appear crucial and lead to drastic changes of the infrared (IR) spectrum: The computed gas-phase IR spectrum shows a very broad absorption band that covers frequencies from about 1000 to 3000 cm(-1) assigned to the labile proton. In mere contrast, a much more localized absorption band around 2600-2700 cm(-1) is predicted in the crystal phase. Finally, effects of the quantization of the proton motion on the hydrogen bond structure were estimated in two ways. First, we constructed the one-dimensional (1D) potential energy surface (PES) for the proton along the O...H...N bridge in a vacuum. The 1D Schrodinger equation was then solved. Next, path integral molecular dynamics (PIMD) was performed in the solid state. Inclusion of quantum effects does not affect the observed change of the most probable tautomer, upon going from the gas phase to the crystal.

摘要

在气相和晶体中,通过基于密度泛函理论(DFT)的第一性原理分子动力学(FPMD),对含有非常短的分子内氢键的邻-羟基希夫碱型化合物 2-(N-甲基-α-亚氨基乙基)-4-氯苯酚的结构、质子转移和振动动力学进行了计算研究。结果表明,在晶体相中,质子很好地定位于 O...H...N 桥的氮侧,与 X 射线衍射实验一致,而在真空中,质子大部分时间更倾向于位于氧侧。因此,环境对这种非常强的氢键的影响似乎至关重要,导致红外(IR)光谱发生剧烈变化:计算得到的气相 IR 光谱显示出一个非常宽的吸收带,其覆盖频率从大约 1000 到 3000 cm(-1),归因于不稳定的质子。相比之下,在晶体相中预测到一个更局部化的吸收带在 2600-2700 cm(-1)左右。最后,以两种方式估计了质子运动的量子化对氢键结构的影响。首先,我们在真空中沿着 O...H...N 桥构建了质子的一维(1D)势能面(PES)。然后求解 1D 薛定谔方程。接下来,在固态下进行路径积分分子动力学(PIMD)。包含量子效应不会影响从气相到晶体时最可能的互变异构体的观察到的变化。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验