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新型红色卤球菌,一种来自海洋太阳能盐场的嗜盐古菌,以及卤球菌属的修订描述。

Halogeometricum rufum sp. nov., a halophilic archaeon from a marine solar saltern, and emended description of the genus Halogeometricum.

机构信息

School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, PR China.

Second Institute of Oceanography, State Oceanic Administration, Hangzhou 310012, PR China.

出版信息

Int J Syst Evol Microbiol. 2010 Nov;60(Pt 11):2613-2617. doi: 10.1099/ijs.0.019463-0. Epub 2009 Dec 18.

Abstract

Two halophilic archaea, strains RO1-4(T) and RO1-64, were isolated from a marine solar saltern in Jiangsu, China. Cells of the two strains were pleomorphic, motile, and stained Gram-negative. Colonies were red-pigmented. Strains RO1-4(T) and RO1-64 were able to grow at 25-55 °C (optimum 40-42 °C), at 2.1-5.1 M NaCl (optimum 3.9 M NaCl), at 0.05-0.7 M MgCl(2) (optimum 0.3 M MgCl(2)) and at pH 6.0-8.5 (optimum pH 7.0). Cells lyse in distilled water and the minimal NaCl concentration to prevent cell lysis is 12 % (w/v). On the basis of 16S rRNA gene sequence analysis, strains RO1-4(T) and RO1-64 were closely related to Halogeometricum borinquense PR3(T) (98.0 and 98.2 % similarity, respectively) and Halosarcina pallida BZ256(T) (97.8 and 97.9 %). The major polar lipids of the two strains were phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and two glycolipids (S-DGD-1 and DGD-1). The DNA G+C contents of strains RO1-4(T) and RO1-64 are 64.9 and 62.4 mol%, respectively. The DNA-DNA hybridization value between strains RO1-4(T) and RO1-64 was 83.0 % and both strains showed low DNA-DNA relatedness with Halogeometricum borinquense PR3(T) (42.5 and 50.1 % relatedness, respectively) and Halosarcina pallida BZ256(T) (37.6 and 42.1 % relatedness). It was concluded that strains RO1-4(T) and RO1-64 represent a novel species of the genus Halogeometricum, for which the name Halogeometricum rufum sp. nov. is proposed. The type strain is RO1-4(T) (=CGMCC 1.7736(T) =JCM 15770(T)).

摘要

两株嗜盐古菌,RO1-4(T) 和 RO1-64 株,从中国江苏的一个海洋晒盐场分离得到。这两株菌的细胞形态多形,运动,革兰氏染色阴性。菌落呈红色。RO1-4(T) 和 RO1-64 株可在 25-55°C(最佳 40-42°C)、2.1-5.1 M NaCl(最佳 3.9 M NaCl)、0.05-0.7 M MgCl2(最佳 0.3 M MgCl2)和 pH 6.0-8.5(最佳 pH 7.0)下生长。细胞在蒸馏水中溶解,防止细胞溶解的最小 NaCl 浓度为 12%(w/v)。基于 16S rRNA 基因序列分析,RO1-4(T) 和 RO1-64 株与 Halogeometricum borinquense PR3(T)(分别为 98.0%和 98.2%相似)和 Halosarcina pallida BZ256(T)(分别为 97.8%和 97.9%相似)密切相关。这两株菌的主要极性脂是磷脂酰甘油、磷脂酰甘油磷酸甲基酯和两种糖脂(S-DGD-1 和 DGD-1)。RO1-4(T) 和 RO1-64 株的 DNA G+C 含量分别为 64.9mol%和 62.4mol%。RO1-4(T) 和 RO1-64 株之间的 DNA-DNA 杂交值为 83.0%,与 Halogeometricum borinquense PR3(T)(分别为 42.5%和 50.1%的相关度)和 Halosarcina pallida BZ256(T)(分别为 37.6%和 42.1%的相关度)的 DNA-DNA 相关度较低。结论是,RO1-4(T) 和 RO1-64 株代表 Halogeometricum 属的一个新种,命名为 Halogeometricum rufum sp. nov.。模式菌株为 RO1-4(T)(=CGMCC 1.7736(T)=JCM 15770(T))。

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