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dbTEU: a protein database of trace element utilization.
Bioinformatics. 2010 Mar 1;26(5):700-2. doi: 10.1093/bioinformatics/btp705. Epub 2010 Jan 6.
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General trends in trace element utilization revealed by comparative genomic analyses of Co, Cu, Mo, Ni, and Se.
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Trace elements in nutrition and metabolism: a review.
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Comparative genomics analysis of the metallomes.
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deep-Sep: a deep learning-based method for fast and accurate prediction of selenoprotein genes in bacteria.
mSystems. 2025 Apr 22;10(4):e0125824. doi: 10.1128/msystems.01258-24. Epub 2025 Mar 10.
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MESPEUS: a database of metal coordination groups in proteins.
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Macrophage Selenoproteins Restrict Intracellular Replication of and Are Essential for Host Immunity.
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InterMetalDB: A Database and Browser of Intermolecular Metal Binding Sites in Macromolecules with Structural Information.
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Bioinformatics of Metalloproteins and Metalloproteomes.
Molecules. 2020 Jul 24;25(15):3366. doi: 10.3390/molecules25153366.
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Bioinformatics of Selenoproteins.
Antioxid Redox Signal. 2020 Sep 1;33(7):525-536. doi: 10.1089/ars.2020.8044. Epub 2020 Apr 23.
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Comparative genomics reveals new evolutionary and ecological patterns of selenium utilization in bacteria.
ISME J. 2016 Aug;10(8):2048-59. doi: 10.1038/ismej.2015.246. Epub 2016 Jan 22.
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Evolution of the Selenoproteome in Helicobacter pylori and Epsilonproteobacteria.
Genome Biol Evol. 2015 Sep 4;7(9):2692-704. doi: 10.1093/gbe/evv177.

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Eukaryotic selenoproteins and selenoproteomes.
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Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization.
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SelenoDB 1.0 : a database of selenoprotein genes, proteins and SECIS elements.
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Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry.
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Zinc through the three domains of life.
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